Construct: ORF TRCN0000488106

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021225.1_s317c1
DNA Barcode:
TCCCCTTGACCAGATCTTTGAGAA
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
ADGRL1 (22859)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488106
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22859 ADGRL1 adhesion G protein-coupled ... NM_014921.5 100% 100%
2 human 22859 ADGRL1 adhesion G protein-coupled ... NM_001008701.3 99.6% 99.5% 395_409del
3 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026478.1 99.1% 99.1% 395_412del;1213_1233del
4 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026479.1 98.7% 98.6% 395_412del;1213_1233del;3688_3689insGGAGCTACCGGGAACCCA
5 human 22859 ADGRL1 adhesion G protein-coupled ... XM_005259818.3 98.3% 98.3% 3647_3718del
6 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026477.1 97.9% 97.9% 395_412del;3665_3736del
7 human 22859 ADGRL1 adhesion G protein-coupled ... XM_011527798.2 97.9% 97.9% 1195_1215del;3668_3739del
8 human 22859 ADGRL1 adhesion G protein-coupled ... XM_011527796.2 97.6% 97.5% 395_409del;1210_1230del;3683_3754del
9 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026475.1 97.5% 97.5% 395_412del;1213_1233del;3686_3757del
10 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026476.1 97.5% 97.5% 395_412del;1213_1233del;3686_3757del
11 human 22859 ADGRL1 adhesion G protein-coupled ... XM_024451420.1 97.5% 97.5% 395_412del;1213_1233del;3686_3757del
12 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026480.1 89% 88.9% (many diffs)
13 human 22859 ADGRL1 adhesion G protein-coupled ... XM_011527801.2 88.7% 88.6% (many diffs)
14 human 22859 ADGRL1 adhesion G protein-coupled ... XM_017026481.1 57.7% 56.8% (many diffs)
15 mouse 330814 Adgrl1 adhesion G protein-coupled ... NM_181039.2 89.6% 98.2% (many diffs)
16 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531122.2 89.3% 97.8% (many diffs)
17 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531120.2 89.2% 97.8% (many diffs)
18 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531121.3 89.2% 97.8% (many diffs)
19 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_011248411.1 84.2% 88.5% (many diffs)
20 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_011248410.1 83.9% 87.5% (many diffs)
21 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531124.2 83.7% 88.5% (many diffs)
22 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531125.2 83.7% 88.5% (many diffs)
23 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_011248412.1 83.5% 87% (many diffs)
24 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_011248414.1 82.7% 88.9% (many diffs)
25 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531126.2 79% 86.8% (many diffs)
26 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531127.2 79% 86.8% (many diffs)
27 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_006531128.2 79% 86.8% (many diffs)
28 mouse 330814 Adgrl1 adhesion G protein-coupled ... XM_011248415.1 65.5% 71.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
4479
ORF length:
4407
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catggcccgc ctagccgcag tgctctggaa tctgtgtgtc accgccgtcc
121tggtcacctc ggccacccaa ggcctgagcc gggccgggct cccgttcggg ctgatgcgcc
181gggagctggc gtgtgaaggc taccccatcg agctgcggtg ccccggcagc gacgtcatca
241tggtggagaa tgccaactac gggcgcacgg acgacaagat ttgcgatgct gaccctttcc
301agatggagaa tgtgcagtgc tacctgccgg acgccttcaa gatcatgtca cagaggtgta
361acaaccgcac ccagtgcgtg gtggtcgccg gctcggatgc ctttcctgac ccctgtcctg
421ggacctacaa gtacctggag gtgcagtacg actgtgtccc ctacatcttc gtgtgcccag
481ggaccctgca gaaggtgctg gagcccacct cgacacacga gtcagagcac cagtctggcg
541catggtgcaa ggacccgctg caggcgggtg accgcatcta cgtgatgccc tggatcccct
601accgcacgga cacactgact gagtatgcct cgtgggagga ctacgtggcc gcccgccaca
661ccaccaccta ccgcctgccc aaccgcgtgg atggcacagg ctttgtggtc tacgatggtg
721ccgtcttcta caacaaggag cgcacgcgca acatcgtcaa gtatgaccta cggacgcgca
781tcaagagcgg ggagacggtc atcaataccg ccaactacca tgacacctcg ccctaccgct
841ggggcggaaa gaccgacatt gacctggcgg tggacgagaa cgggctgtgg gtcatctacg
901ccactgaggg caacaacggg cggctggtgg tgagccagct gaacccctac acactgcgct
961ttgagggcac gtgggagacg ggttacgaca agcgctcggc atccaacgcc ttcatggtgt
1021gtggggtcct gtacgtcctg cgttccgtgt acgtggatga tgacagcgag gcggctggca
1081accgcgtgga ctatgccttc aacaccaatg ccaaccgcga ggagcctgtc agcctcacct
1141tccccaaccc ctaccagttc atctcctccg ttgactacaa ccctcgcgac aaccagctgt
1201acgtctggaa caactatttc gtggtgcgct acagcctgga gttcgggccg cccgacccca
1261gtgctggccc agccacttcc ccacccctca gcacgaccac cacagccagg cccacgcccc
1321tcaccagcac agcctcgccc gcagccacca ccccgctccg ccgggcaccc ctcaccacgc
1381acccagtggg tgccatcaac cagctgggac ctgatctgcc tccagccaca gccccagtcc
1441ccagcacccg gcggccccca gccccgaatc tacacgtgtc ccctgagctc ttctgcgagc
1501cccgagaggt acggcgggtc cagtggccgg ccacccagca gggcatgctg gtggagaggc
1561cctgccccaa ggggactcga ggaattgcct ccttccagtg tctaccagcc ttggggctct
1621ggaacccccg gggccctgac ctcagcaact gcacctcccc ctgggtcaac caggtggccc
1681agaagatcaa gagtggggag aacgcggcca acatcgccag cgagctggcc cgacacaccc
1741ggggctccat ctacgcgggg gacgtctcct cctctgtgaa gctgatggag cagctgctgg
1801acatcctgga tgcccagctg caggccctgc ggcccatcga gcgcgagtca gccggcaaga
1861actacaacaa gatgcacaag cgagagagaa cttgtaagga ttatatcaag gccgtggtgg
1921agacagtgga caatctgctc cggccagaag ctctggagtc ctggaaggac atgaatgcca
1981cggagcaggt gcacacggcc accatgctcc tcgacgtcct ggaggagggc gccttcctgc
2041tggccgacaa tgtcagggag cctgcccgct tcctggctgc caaggagaac gtggtcctgg
2101aggtcacagt cctgaacaca gagggccagg tgcaggagct ggtgttcccc caggaggagt
2161acccgagaaa gaactccatc cagctgtctg ccaaaaccat caagcagaac agccgcaatg
2221gggtggtcaa agttgtcttc atcctctaca acaacctggg cctcttcctg tccacggaga
2281atgccacagt gaagctggcc ggcgaagcag gcccgggtgg ccctgggggc gcctctctag
2341tggtgaactc acaggtcatc gcagcatcca tcaacaagga gtccagccgc gtcttcctca
2401tggaccctgt catcttcacc gtggcccacc tggaggacaa gaaccacttc aatgctaact
2461gctccttctg gaactactcg gagcgttcca tgctgggcta ctggtcgacc caaggctgcc
2521gcctggtgga gtccaacaag acccatacca cgtgtgcctg cagccacctc accaacttcg
2581ctgtgctcat ggctcaccgt gagatctacc agggccgcat caacgagctg ctgctgtcgg
2641tcatcacctg ggtgggcatt gtgatctccc tggtctgctt ggccatctgc atctccacct
2701tctgcttcct gcgggggctg cagaccgacc gcaacaccat ccacaagaac ctgtgcatca
2761acctcttcct ggctgagctg ctcttcctgg tcgggatcga caagactcag tatgagattg
2821cctgccccat cttcgccggc ctgctgcact atttcttcct ggctgccttc tcctggctgt
2881gcctggaggg cgtgcacctc tacctgctac tagtggaggt gtttgagagc gagtattccc
2941gcaccaagta ctactacctg ggtggctact gcttcccggc cctggtggtg ggcatcgcgg
3001ctgccattga ctaccgcagc tacggcaccg agaaggcctg ctggctccga gtggacaatt
3061acttcatctg gagtttcatc gggccagtct ccttcgttat cgtggtcaac ctggtgttcc
3121tcatggtgac cctgcacaag atgatccgaa gctcatctgt gctcaagccc gactccagcc
3181gcctggacaa cattaaatcc tgggcgctgg gggccatcgc gctgctgttc ctgctgggcc
3241tcacctgggc tttcggcctc ctcttcatca acaaggagtc ggtggtcatg gcctatctct
3301tcaccacctt caacgccttc cagggggtct tcatcttcgt ctttcactgc gccttacaga
3361agaaggtgca caaggagtac agcaagtgcc tgcgtcactc ctactgctgc atccgctccc
3421cacccggggg cactcacgga tccctcaaga cctcagccat gcgaagcaac acccgctact
3481acacagggac ccagagccga attcggagga tgtggaatga cactgtgagg aaacagacgg
3541agtcctcctt catggcgggt gacatcaaca gcacccccac cctgaaccga ggtaccatgg
3601ggaaccacct gctgaccaac cccgtgctgc agccccgtgg gggcaccagt ccctacaaca
3661ccctcatcgc cgagtcagtg ggcttcaatc cctcctcgcc ccctgtcttc aactccccag
3721ggagctaccg ggaacccaag caccccttgg gaggccggga agcctgtggc atggacaccc
3781tgcccctgaa cggcaacttc aataacagtt actccttgcg aagtggggat ttccctcccg
3841gggatggggg ccctgagccg ccccgaggcc ggaacctagc cgatgcggcg gcctttgaga
3901agatgatcat ctcagagctg gtgcacaaca acctgcgggg gagcagcagc gcggccaagg
3961gccctccacc gcctgagccc cctgtgccac ctgtgccagg gggcgggggc gaggaagagg
4021cgggcgggcc cgggggtgct gaccgggccg agattgaact tctctataag gccctggagg
4081agcctctgct gctgccccgg gcccagtcgg tgctgtacca gagcgatctg gacgagtcgg
4141agagctgcac ggccgaggac ggcgccacca gccggcccct ctcctcccct cctggccggg
4201actccctcta tgccagcggg gccaacctgc gggactcacc ctcctacccg gacagcagcc
4261ctgaGGGGCC CAGTGAGGCC CTGCCCCCAC CCCCTCCCGC ACCCCCCGGC CCCCCCGAAA
4321TCTACTACAC CTCGCGCCCG CCAGCCCTGG TGGCCCGGAA TCCCCTGCAG GGCTACTACC
4381AGGTGCGGCG TCCTAGCCAC GAGGGCTACC TGGCAGCCCC AGGCCTTGAG GGGCCAGGGC
4441CCGATGGGGA CGGGCAGATG CAGCTGGTCA CCAGTCTCTA GGACCCAGCT TTCTTGTACA
4501AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
4561AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GGCTTTATAT ATCTTGTGGA
4621AAGGACGATC CCCTTGACCA GATCTTTGAG AAACGCGTTA AGTCgacaat caacctctgg
4681attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)