Construct: ORF TRCN0000488213

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019404.1_s317c1
DNA Barcode:
GCCCTTTATAACTTGGCCGAAAGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NMUR1 (10316)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488213
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10316 NMUR1 neuromedin U receptor 1 XM_011510487.3 99.8% 99.5% 539G>A;1209_1210insG
2 human 10316 NMUR1 neuromedin U receptor 1 NM_006056.5 94.4% 94.1% 1_69del;608G>A;1278_1279insG
3 human 10316 NMUR1 neuromedin U receptor 1 XM_006712195.3 74.2% 67.2% (many diffs)
4 human 10316 NMUR1 neuromedin U receptor 1 XM_011510488.2 72.2% 65.5% (many diffs)
5 human 10316 NMUR1 neuromedin U receptor 1 XM_006712196.3 68.5% 64.9% (many diffs)
6 human 10316 NMUR1 neuromedin U receptor 1 XM_011510489.2 67.3% 65.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
75
ORF end:
1287
ORF length:
1212
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcgc caccatggct tgcaatggca gtgcggccag ggggcacttt gaccctgagg
121acttgaacct gactgacgag gcactgagac tcaagtacct ggggccccag cagacagagc
181tgttcatgcc catctgtgcc acatacctgc tgatcttcgt ggtgggcgct gtgggcaatg
241ggctgacctg tctggtcatc ctgcgccaca aggccatgcg cacgcctacc aactactacc
301tcttcagcct ggccgtgtcg gacctgctgg tgctgctggt gggcctgccc ctggagctct
361atgagatgtg gcacaactac cccttcctgc tgggcgttgg tggctgctat ttccgcacgc
421tactgtttga gatggtctgc ctggcctcag tgctcaacgt cactgccctg agcgtggaac
481gctatgtggc cgtggtgcac ccactccagg ccaggtccat ggtgacgcgg gcccatgtgc
541gccgagtgct tggggccgtc tggggtcttg ccatgctctg ctccctgccc aacaccagcc
601tgcacggcat ccagcagctg cacgtgccct gccggggccc agtgccagac tcagctgttt
661gcatgctggt ccgcccacgg gccctctaca acatggtagt gcagaccacc gcgctgctct
721tcttctgcct gcccatggcc atcatgagcg tgctctacct gctcattggg ctgcgactgc
781ggcgggagag gctgctgctc atgcaggagg ccaagggcag gggctctgca gcagccaggt
841ccagatacac ctgcaggctc cagcagcacg atcggggccg gagacaagtg accaagatgc
901tgtttgtcct ggtcgtggtg tttggcatct gctgggcccc gttccacgcc gaccgcgtca
961tgtggagcgt cgtgtcacag tggacagatg gcctgcacct ggccTTCCAG CACGTGCACG
1021TCATCTCCGG CATCTTCTTC TACCTGGGCT CGGCGGCCAA CCCCGTGCTC TATAGCCTCA
1081TGTCCAGCCG CTTCCGAGAG ACCTTCCAGG AGGCCCTGTG CCTCGGGGCC TGCTGCCATC
1141GCCTCAGACC CCGCCACAGC TCCCACAGCC TCAGCAGGAT GACCACAGGC AGCACCCTGT
1201GTGATGTGGG CTCCCTGGGC AGCTGGGTCC ACCCCCTGGC TGGGAACGAT GGCCCAGAGG
1261CGCAGCAAGA GACCGATCCA TCCGACCCAG CTTTCTTGTA CAAAGTGGTT GATATCGGTA
1321AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
1381TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAG CCCTTTATAA
1441CTTGGCCGAA AGTACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
1501att

Download FASTA (ORF) (Full)