Construct: ORF TRCN0000488260

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019422.1_s317c1
DNA Barcode:
CTTGCCTTCCACCGGTTGCGGGCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCR10 (2826)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488260
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2826 CCR10 C-C motif chemokine recepto... NM_016602.3 99.9% 99.7% 1086_1087insG
2 mouse 12777 Ccr10 chemokine (C-C motif) recep... NM_007721.4 85.1% 87.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
63
ORF end:
1152
ORF length:
1089
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaagcca
61ccatggggac ggaggccaca gagcaggttt cctggggcca ttactctggg gatgaagagg
121acgcatactc ggctgagcca ctgccggagc tttgctacaa ggccgatgtc caggccttca
181gccgggcctt ccaacccagt gtctccctga ccgtggctgc gctgggtctg gccggcaatg
241gcctggtcct ggccacccac ctggcagccc gacgcgcagc gcgctcgccc acctctgccc
301acctgctcca gctggccctg gccgacctct tgctggccct gactctgccc ttcgcggcag
361caggggctct tcagggctgg agtctgggaa gtgccacctg ccgcaccatc tctggcctct
421actcggcctc cttccacgcc ggcttcctct tcctggcctg tatcagcgcc gaccgctacg
481tggccatcgc gcgagcgctc ccagccgggc cgcggccctc cactcccggc cgcgcacact
541tggtctccgt catcgtgtgg ctgctgtcac tgctcctggc gctgcctgcg ctgctcttca
601gccaggatgg gcagcgggaa ggccaacgac gctgtcgcct catcttcccc gagggcctca
661cgcagacggt gaagggggcg agcgccgtgg cgcaggtggc cctgggcttc gcgctgccgc
721tgggcgtcat ggtagcctgc tacgcgcttc tgggccgcac gctgctggcc gccagggggc
781ccgagcgccg gcgtgcgctg cgcgtcgtgg tggctctggt ggcggccTTC GTGGTGCTGC
841AGCTGCCCTA CAGCCTCGCC CTGCTGCTGG ATACTGCCGA TCTACTGGCT GCGCGCGAGC
901GGAGCTGCCC TGCCAGCAAA CGCAAGGATG TCGCACTGCT GGTGACCAGC GGCTTGGCCC
961TCGCCCGCTG TGGCCTCAAT CCCGTTCTCT ACGCCTTCCT GGGCCTGCGC TTCCGCCAGG
1021ACCTGCGGAG GCTGCTACGG GGTGGGAGCT GCCCCTCAGG GCCTCAACCC CGCCGCGGCT
1081GCCCCCGCCG GCCCCGCCTT TCTTCCTGCT CAGCTCCCAC GGAGACCCAC AGTCTCTCCT
1141GGGACAACGA CCCAGCTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1201CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1261TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACTTGCC TTCCACCGGT TGCGGGCAAC
1321GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)

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