Construct: ORF TRCN0000488564

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021059.1_s317c1
DNA Barcode:
TCGAATCTTCTCCGCTGAAATTAC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
ADGRG6 (57211)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488564
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57211 ADGRG6 adhesion G protein-coupled ... NM_001032395.2 100% 100%
2 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715518.2 99.8% 99.8% 101_103delCAG;1395G>A;3299A>G
3 human 57211 ADGRG6 adhesion G protein-coupled ... NM_198569.3 97.7% 97.6% 1138_1221del;1476G>A;3380A>G
4 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715516.2 97.6% 97.6% (many diffs)
5 human 57211 ADGRG6 adhesion G protein-coupled ... XM_006715517.2 97.6% 97.6% (many diffs)
6 human 57211 ADGRG6 adhesion G protein-coupled ... XM_011535964.1 97.5% 97.5% (many diffs)
7 human 57211 ADGRG6 adhesion G protein-coupled ... NM_001032394.2 95.1% 95.5% 3488_3533del;3579_3580ins133
8 human 57211 ADGRG6 adhesion G protein-coupled ... NM_020455.5 93% 93.3% 1138_1221del;3572_3617del;3663_3664ins133
9 human 57211 ADGRG6 adhesion G protein-coupled ... XM_005267061.3 92.9% 93.2% (many diffs)
10 human 57211 ADGRG6 adhesion G protein-coupled ... XM_017011085.1 86.7% 86.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
3738
ORF length:
3666
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgatgttt cgctcagatc gaatgtggag ctgccattgg aaatggaagc
121ccagtcctct cctgttctta tttgctttat atatcatgtg tgttcctcac tcagtgtggg
181gatgtgccaa ctgccgagtg gttttgtcca acccttctgg gacctttact tctccatgct
241accctaacga ctacccaaac agccaggctt gcatgtggac gctccgagcc cccaccggtt
301atatcattca gataacattt aacgactttg acattgaaga agctcccaat tgcatttatg
361actcattatc ccttgataat ggagagagcc agactaaatt ttgtggagca actgccaaag
421gcctatcatt taactcaagt gcgaatgaga tgcatgtgtc cttttcaagt gactttagca
481tccagaagaa aggtttcaat gccagctaca tcagagttgc cgtgtcctta aggaatcaaa
541aggtcatttt accccagaca tcagatgctt accaggtatc tgttgcaaaa agcatctcta
601ttccagagct cagtgctttc acactctgct ttgaagcaac caaagttggc catgaagaca
661gtgattggac agctttctcc tactcaaatg catccttcac acaattgctc agttttggaa
721aggccaagag tggctacttt ctatccattt ctgattcaaa atgtttgttg aataatgcat
781tacctgtcaa agaaaaagaa gacatttttg cagaaagctt tgaacagctc tgccttgttt
841ggaataattc tttgggctct attggtgtaa atttcaaaag aaactatgaa acagttccat
901gtgattctac cattagtaaa gttattcctg ggaatgggaa attgttgttg ggctccaatc
961aaaatgaaat tgtctctcta aaaggggaca tttataactt tcgactttgg aattttacca
1021tgaatgccaa aatcctctcc aacctcagct gtaatgtgaa agggaatgta gtcgactggc
1081aaaatgactt ctggaatatc ccaaacctag ctctgaaagc tgaaagcaac ctaagctgtg
1141gttcctacct gatcccgctc ccagcagcag aactggccag ctgtgcagac ctggggaccc
1201tctgtcaaga tggaattatc tatagaatat ccgtagtgat tcagaacatc cttcgtcacc
1261ctgaggtaaa agtacagagc aaggtggcag aatggctcaa ttcaaccttc caaaattgga
1321actacacggt ttatgtcgtt aatatcagtt ttcacctgag tgctggagag gacaagatta
1381aagtcaagag aagccttgag gatgagccaa ggttggtgct ttgggccctt ctagtttaca
1441atgctaccaa caatactaat ttagaaggaa aaatcattca gcagaagctc ctaaaaaata
1501atgagtcctt ggatgaaggc ttgaggctac atacagtgaa tgtgagacaa ctgggtcatt
1561gtcttgccat ggaggaaccc aaaggctact actggccatc tatccaacct tctgaatacg
1621ttcttccttg tccagacaag cctggctttt ctgcttctcg gatatgtttt tacaatgcta
1681ccaacccatt ggtaacctac tggggacctg ttgatatctc caactgttta aaagaagcaa
1741atgaagttgc taaccagatt ttaaatttaa ctgctgatgg gcagaactta acctcagcca
1801atattaccaa cattgtggaa caggtcaaaa gaattgtgaa taaagaagaa aacattgata
1861taacacttgg ctcaactcta atgaatatat tttctaatat cttaagcagt tcagacagtg
1921acttgcttga gtcatcttct gaagctttaa aaacaattga tgaattggcc ttcaagatag
1981acctaaatag cacatcacat gtgaatatta caactcggaa cttggctctc agcgtatcat
2041ccctgttacc agggacaaat gcaatttcaa attttagcat tggtcttcca agcaataatg
2101aatcgtattt ccagatggat tttgagagtg gacaagtgga tccactggca tctgtaattt
2161tgcctccaaa cttacttgag aatttaagtc cagaagattc tgtattagtt agaagagcac
2221agtttacttt cttcaacaaa actggacttt tccaggatgt aggaccccaa agaaaaactt
2281tagtgagtta tgtgatggcg tgcagtattg gaaacattac tatccagaat ctgaaggatc
2341ctgttcaaat aaaaatcaaa catacaagaa ctcaggaagt gcatcatccc atctgtgcct
2401tctgggatct gaacaaaaac aaaagttttg gaggatggaa cacgtcagga tgtgttgcac
2461acagagattc agatgcaagt gagacagtct gcctgtgtaa ccacttcaca cactttggag
2521ttctgatgga ccttccaaga agtgcctcac agttagatgc aagaaacact aaagtcctca
2581ctttcatcag ctatattggg tgtggaatat ctgctatttt ttcagcagca actctcctga
2641catatgttgc ttttgagaaa ttgcgaaggg attatccctc caaaatcttg atgaacctga
2701gcacagccct gctgttcctg aatctcctct tcctcctaga tggctggatc acctccttca
2761atgtggatgg actttgcatt gctgttgcag tcctgttgca tttcttcctt ctggcaacct
2821ttacctggat ggggctagaa gcaattcaca tgtacattgc tctagttaaa gtatttaaca
2881cttacattcg ccgatacatt ctaaaattct gcatcattgg ctggggtttg cctgccttag
2941tggtgtcagt tgttctagcg agcagaaaca acaatgaagt ctatggaaaa gaaagttatg
3001ggaaagaaaa aggtgatgaa ttctgttgga ttcaagatcc agtcatattt tatgtgacct
3061gtgctgggta ttttggagtc atgttttttc tgaacattgc catgttcatt gtggtaatgg
3121tgcagatctg tgggaggaat ggcaagagaa gcaaccggac cctgagagaa gaagtgttaa
3181ggaacctgcg cagtgtggtt agcttgacct ttctgttggg catgacatgg ggttttgcat
3241tctttgcctg gggaccctta aatatcccct tcatgtacct cttctccatc ttcaattcat
3301tacaaggctt atttatattc atcttccact gtgctatgaa ggagaatgtt cagaaacagt
3361ggcggcggca tctctgctgt ggtagatttc ggttagcaga taactcagat tGGAGTAAGA
3421CAGCTACCAA TATCATCAAG AAAAGTTCTG ATAATCTAGG AAAATCTTTG TCTTCAAGCT
3481CCATTGGTTC CAACTCAACC TATCTTACAT CCAAATCTAA ATCCAGCTCT ACCACCTATT
3541TCAAAAGGAA TAGCCACACA GACAGTGCTT CCATGGACAA GTCCTTGTCA AAACTGGCCC
3601ATGCTGATGG AGATCAAACA TCAATCATCC CTGTCCATCA GGTCATTGAT AAGGTCAAGG
3661GTTATTGCAA TGCTCATTCA GACAACTTCT ATAAAAATAT TATCATGTCA GACACCTTCA
3721GCCACAGCAC AAAGTTTTAA GACCCAGCTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
3781CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
3841AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGATCGA ATCTTCTCCG
3901CTGAAATTAC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)