Construct: ORF TRCN0000488858

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021382.1_s317c1
DNA Barcode:
ACGGATAGACCCTACTCCGCACTC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
MOXD1 (26002)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488858
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26002 MOXD1 monooxygenase DBH like 1 XM_017010714.2 91% 89.9% (many diffs)
2 human 26002 MOXD1 monooxygenase DBH like 1 NM_015529.4 86.7% 86.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1701
ORF length:
1635
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaacaat
61tgaccatgaa ttcttttctc tctgtattta ggtatcctga tttttccttt ccatattttc
121cacaggatta ttttacaaat gcaaatagag agttgaaaaa agatgctcag caagattacc
181atctagaata tgccatggaa aatagcacac acacaataat tgaatttacc agagagctgc
241atacatgtga cataaatgac aagagtataa cggatagcac tgtgagagtg atctgggcct
301accaccatga agatgcagga gaagctggtc ccaagtacca tgactccaat aggggcacca
361agagtttgcg gttattgaat cctgagaaaa ctagtgtgct atctacagcc ttaccatact
421ttgatctggt aaatcaggac gtccccatcc caaacaaaga tacaacatat tggtgccaaa
481tgtttaagat tcctgtgttc caagaaaagc atcatgtaat aaaggttgag ccagtgatac
541agagaggcca tgagagtctg gtgcaccaca tcctgctcta tcagtgcagc aacaacttta
601acgacagcgt tctggagtcc ggccacgagt gctatcaccc caacatgccc gatgcattcc
661tcacctgtga aactgtgatt tttgcctggg ctattggtgg agagggcttt tcttatccac
721ctcatgttgg attatccctt ggcactccat tagatccgca ttatgtgctc ctagaagtcc
781attatgataa tcccacttat gaggaaggct taatagataa ttctggactg aggttatttt
841acacaatgga tataaggaaa tatgatgctg gggtgattga ggctggcctc tgggtgagcc
901tcttccatac catccctcca gggatgcctg agttccagtc tgagggtcac tgcactttgg
961agtgcctgga agaggctctg gaagccgaaa agccaagtgg aattcatgtg tttgctgttc
1021ttctccatgc tcacctggct ggcagaggca tcaggctgcg tcattttcga aaagggaagg
1081aaatgaaatt acttgcctat gatgatgatt ttgacttcaa tttccaggag tttcagtatc
1141taaaggaaga acaaacaatc ttaccaggag ataacctaat tactgagtgt cgctacaaca
1201cgaaagatag agctgagatg acttggggag gactaagcac caggagtgaa atgtgtctct
1261cataccttct ttattaccca agaattaatc ttactcgatg tgcaagtatt ccagacatta
1321tggaacaact tcagttcatt ggggttaagg agatctacag accagtcacg acctggCCTT
1381TCATTATCAA AAGTCCCAAG CAATATAAAA ACCTTTCTTT CATGGATGCT ATGAATAAGT
1441TTAAATGGAC TAAAAAGGAA GGTCTCTCCT TCAACAAGCT GGTCCTCAGC CTGCCAGTGA
1501ATGTGAGATG TTCCAAGACA GACAATGCTG AGTGGTCGAT TCAAGGAATG ACAGCATTAC
1561CTCCAGATAT AGAAAGACCC TATAAAGCAG AACCTTTGGT GTGTGGCACG TCTTCTTCCT
1621CTTCCCTGCA CAGAGATTTC TCCATCAACT TGCTTGTTTG CCTTCTGCTA CTCAGCTGCA
1681CGCTGAGCAC CAAGAGCTTG TGAAAGCTTG ACCCAGCTTT CTTGTACAAA GTGGTTGATA
1741TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
1801CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAACGGA
1861TAGACCCTAC TCCGCACTCA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
1921tgaaagatt

Download FASTA (ORF) (Full)