Construct: ORF TRCN0000489400

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020449.1_s317c1
DNA Barcode:
CTCGCCACCCATCAACGGCCTCCT
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
NEK2 (4751)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489400
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4751 NEK2 NIMA related kinase 2 NM_002497.4 99.7% 100% (many diffs)
2 human 4751 NEK2 NIMA related kinase 2 XM_005273147.2 97.9% 98.2% (many diffs)
3 human 4751 NEK2 NIMA related kinase 2 NM_001204183.1 85.5% 83.6% (many diffs)
4 human 4751 NEK2 NIMA related kinase 2 NM_001204182.1 85.4% 83.8% (many diffs)
5 mouse 18005 Nek2 NIMA (never in mitosis gene... NM_010892.3 83% 88% (many diffs)
6 mouse 18005 Nek2 NIMA (never in mitosis gene... XM_006497123.3 81.7% 86.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1407
ORF length:
1335
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgccttcc cgggcggagg actatgaagt gttgtacacc attggcacag
121gctcctacgg ccgctgccag aagatccgga ggaagagtga tggcaagata ttagtttgga
181aagaacttga ctatggctcc atgacagaag ctgagaaaca gatgcttgtt tctgaagtga
241atttgcttcg tgaactgaaa catccaaaca tcgttcgtta ctatgatcgg attattgacc
301ggaccaatac aacactgtac attgtaatgg aatattgtga aggaggggat ctggctagtg
361taattacaaa gggaaccaag gaaaggcaat acttagatga agagtttgtt cttcgagtga
421tgactcagtt gactctggcc ctgaaggaat gccacagacg aagtgatggt ggtcataccg
481tattgcatcg ggatctgaaa ccagccaatg ttttcctgga tggcaagcaa aacgtcaagc
541ttggagactt tgggctagct agaatattaa accacgacac gagttttgca aaaacatttg
601ttggcacacc ttattacatg tctcctgaac aaatgaatcg catgtcctac aatgagaaat
661cagatatctg gtcattgggc tgcttgctgt atgagttatg tgcattaatg cctccattta
721cagcttttag ccagaaagaa ctcgctggga aaatcagaga aggcaaattc aggcgaattc
781cataccgtta ctctgatgaa ttgaatgaaa ttattacgag gatgttaaac ttaaaggatt
841accatcgacc ttctgttgaa gaaattcttg agaacccttt aatagcagat ttggttgcag
901acgagcaaag aagaaatctt gagagaagag ggcgacaatt aggagagcca gaaaaatcgc
961aggattccag ccctgtattg agtgagctga aactgaagga aattcagtta caggagcgag
1021agcgagctct caaagcaaga gaagaaagat tGGAGCAGAA AGAACAGGAG CTTTGTGTTC
1081GTGAGAGACT AGCAGAGGAC AAACTGGCTA GAGCAGAAAA TCTGTTGAAG AACTACAGCT
1141TGCTAAAGGA ACGGAAGTTC CTGTCTCTGG CAAGTAATCC AGAACTTCTT AATCTTCCAT
1201CCTCAGTAAT TAAGAAGAAA GTTCATTTCA GTGGGGAAAG TAAAGAGAAC ATCATGAGGA
1261GTGAGAATTC TGAGAGTCAG CTCACATCTA AGTCCAAGTG CAAGGACCTG AAGAAAAGGC
1321TTCACGCTGC CCAGCTGCGT GCTCAAGCCC TGTCAGATAT TGAGAAAAAT TACCAACTGA
1381AAAGCAGGCA GATCCTGGGC ATGCGCTAGG ACCCAGCTTT CTTGTACAAA GTGGTTGATA
1441TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
1501CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGACTCGC
1561CACCCATCAA CGGCCTCCTA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
1621tgaaagatt

Download FASTA (ORF) (Full)