Construct: ORF TRCN0000489409

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019972.1_s317c1
DNA Barcode:
ATGGTCTATATCTTACATACTTGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR26 (2849)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489409
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2849 GPR26 G protein-coupled receptor 26 NM_153442.4 99.7% 99.7% 489A>G;642G>C;1011_1012insG
2 mouse 233919 Gpr26 G protein-coupled receptor 26 NM_173410.3 91.3% 94.9% (many diffs)
3 mouse 233919 Gpr26 G protein-coupled receptor 26 XM_006507766.3 71.9% 74.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1083
ORF length:
1014
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat gaactcgtgg gacgcgggcc tggcggggct actggtgggc acgatgggcg
121tctcgctgct gtccaacgcg ctggtgctgc tctgcctgct gcacagcgcg gacatccgcc
181gccaggcgcc ggcgctcttc accctgaacc tcacgtgcgg gaacctgctg tgcaccgtgg
241tcaacatgcc gctcacgctg gccggcgtcg tggcgcagcg gcagccggcg ggcgaccgcc
301tgtgccgcct ggctgccttc ctcgacacct tcctggctgc caactccatg ctcagcatgg
361ccgcgctcag catcgaccgc tgggtggccg tggtcttccc gctgagctac cgggccaaga
421tgcgcctccg cgacgcggcg ctcatggtgg cctacacgtg gctgcacgcg ctcaccttcc
481cagccgccgc gctcgccctg tcctggctcg gcttccacca gctgtacgcc tcgtgcacgc
541tgtgcagccg gcggccggac gagcgcctgc gcttcgccgt cttcactggc gccttccacg
601ctctcagctt cctgctctcc ttcgtcgtgc tctgctgcac gtacctcaag gtgctcaagg
661tggcccgctt ccattgcaag cgcatcgacg tgatcaccat gcagacgctc gtgctgctgg
721tggacctgca cccCAGTGTG CGGGAACGCT GTCTGGAGGA GCAGAAGCGG AGGCGACAGC
781GAGCCACCAA GAAGATCAGC ACCTTCATAG GGACCTTCCT TGTGTGCTTC GCGCCCTATG
841TGATCACCAG GCTAGTGGAG CTCTTCTCCA CGGTGCCCAT CGGCTCCCAC TGGGGGGTGC
901TGTCCAAGTG CTTGGCGTAC AGCAAGGCCG CATCCGACCC CTTTGTGTAC TCCTTACTGC
961GACACCAGTA CCGCAAAAGC TGCAAGGAGA TTCTGAACAG GCTCCTGCAC AGACGCTCCA
1021TCCACTCCTC TGGCCTCACA GGCGACTCTC ACAGCCAGAA CATTCTGCCG GTGTCTGAGG
1081ACCCAGCTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1141GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1201TTTATATATC TTGTGGAAAG GACGAATGGT CTATATCTTA CATACTTGCA CGCGTTAAGT
1261Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)