Construct: ORF TRCN0000489832

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019156.1_s317c1
DNA Barcode:
TCATACGTCGTTGTAGGAGTTGAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADGRB1 (575)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489832
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 575 ADGRB1 adhesion G protein-coupled ... NM_001702.3 89.8% 87.8% (many diffs)
2 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013696.1 87.9% 86% (many diffs)
3 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013695.1 87.6% 85.7% (many diffs)
4 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013694.1 87.3% 85.4% (many diffs)
5 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013692.1 85.6% 83.7% (many diffs)
6 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013691.1 85.5% 83.7% (many diffs)
7 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013693.1 85.4% 83.5% (many diffs)
8 human 575 ADGRB1 adhesion G protein-coupled ... XM_017013697.1 82.2% 80.4% (many diffs)
9 human 575 ADGRB1 adhesion G protein-coupled ... XM_011517202.2 81.4% 79.6% 3117G>C;3397_3398ins100;3483_3484ins690
10 mouse 107831 Adgrb1 adhesion G protein-coupled ... NM_174991.3 79.5% 83.6% (many diffs)
11 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_011245404.1 79.3% 83.3% (many diffs)
12 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_011245403.1 77.9% 81.9% (many diffs)
13 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_006520269.2 77.7% 81.7% (many diffs)
14 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_006520270.2 77.6% 81.6% (many diffs)
15 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_006520271.2 77.5% 81.5% (many diffs)
16 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_011245406.2 70.6% 75.3% (many diffs)
17 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_011245405.1 70% 73.5% (many diffs)
18 mouse 107831 Adgrb1 adhesion G protein-coupled ... XR_383967.3 65.5% (many diffs)
19 mouse 107831 Adgrb1 adhesion G protein-coupled ... XR_383969.2 59.3% (many diffs)
20 mouse 107831 Adgrb1 adhesion G protein-coupled ... XR_875215.1 59.1% (many diffs)
21 mouse 107831 Adgrb1 adhesion G protein-coupled ... XM_006520276.2 44.3% 45.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
75
ORF end:
4350
ORF length:
4275
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcgc caccatgagg ggccaggccg ccgccccggg ccccgtctgg atcctcgccc
121cgctgctact gctgctgctg ctgctgggac gccgcgcgcg ggcggccgcc ggagcagacg
181cggggcccgg gcccgagccg tgcgccacgc tggtgcaggg aaagttcttc ggctacttct
241ccgcggccgc cgtgttcccg gccaacgcct cgcgctgctc ctggacgcta cgcaacccgg
301acccgcggcg ctacactctc tacatgaagg tggccaaggc gcccgtgccc tgcagcggcc
361ccggccgcgt gcgcacctac cagttcgact ccttcctcga gtccacgcgc acctacctgg
421gcgtggagag cttcgacgag gtgctgcggc tctgcgaccc ctccgcaccc ctggccttcc
481tgcaggccag caagcagttc ctgcagatgc ggcgccagca gccgccccag cacgacgggc
541tccggccccg ggccgggccg ccgggcccca ccgacgactt ctccgtggag tacctggtgg
601tggggaaccg caaccccagc cgtgccgcct gccagatgct gtgccgctgg ctggacgcgt
661gtctggccgg tagtcgcagc tcgcacccct gcgggatcat gcagaccccc tgcgcctgcc
721tgggcggcga ggcgggcggc cctgccgcgg gacccctggc cccccgcggg gatgtctgct
781tgagagatgc ggtggctggt ggccctgaaa actgcctcac cagcctgacc caggaccggg
841gcgggcacgg cgccacaggc ggctggaagc tgtggtccct gtggggcgaa tgcacgcggg
901actgcggggg aggcctccag acgcggacgc gcacctgcct gcccgcgccg ggcgtggagg
961gcggcggctg cgagggggtg ctggaggagg gtcgccagtg caaccgcgag gcctgcggcc
1021ccgctgggcg caccagctcc cggagccagt ccctgcggtc cacagatgcc cggcggcgcg
1081aggagctggg ggacgagctg cagcagtttg ggttcccagc cccccagacc ggtgacccag
1141cagccgagga gtggtccccg tggagcgtgt gctccagcac ctgcggcgag ggctggcaga
1201cccgcacgcg cttctgcgtg tcctcctcct acagcacgca gtgcagcgga cccctgcgcg
1261agcagcggct gtgcaacaac tctgccgtgt gcccagtgca tggtgcctgg gatgagtggt
1321cgccctggag cctctgctcc agcacctgtg gccgtggctt tcgggatcgc acgcgcacct
1381gcaggccccc ccagtttggg ggcaacccct gtgagggccc tgagaagcaa accaagttct
1441gcaacattgc cctgtgccct ggccgggcag tggatggaaa ctggaatgag tggtcgagct
1501ggagcgcctg ctccgccagc tgctcccagg gccgacagca gcgcacgcgt gaatgcaacg
1561ggccttccta cgggggtgcg gagtgccagg gccactgggt ggagacccga gactgcttcc
1621tgcagcagtg cccagtggat ggcaagtggc aggcctgggc gtcatggggc agttgcagcg
1681tcacgtgtgg ggctggcagc cagcgacggg agcgtgtctg ctctgggccc ttcttcgggg
1741gagcagcctg ccagggcccc caggatgagt accggcagtg cggcacccag cggtgtcccg
1801agccccatga gatctgtgat gaggacaact ttggtgctgt gatctggaag gagaccccag
1861cgggagaggt ggctgctgtc cggtgtcccc gcaacgccac aggactcatc ctgcgacggt
1921gtgagctgga cgaggaaggc atcgcctact gggagccccc cacctacatc cgctgtgttt
1981ccattgacta cagaaacatc cagatgatga cccgggagca cctggccaag gctcagcgag
2041ggctgcctgg ggagggggtc tcggaggtca tccagacact ggtggagatc tctcaggacg
2101ggaccagcta cagtggggac ctgctgtcca ccatcgatgt cctgaggaac atgacagaga
2161ttttccggag agcgtactac agccccaccc ctggggacgt acagaacttt gtccagatcc
2221ttagcaacct gttggcagag gagaatcggg acaagtggga ggaggcccag ctggcgggcc
2281ccaacgccaa ggagctgttc cggctggtgg aggactttgt ggacgtcatc ggcttccgca
2341tgaaggacct gagggatgca taccaggtga cagacaacct ggttctcagc atccataagc
2401tcccagccag cggagccact gacatcagct tccccatgaa gggctggcgg gccacgggtg
2461actgggccaa ggtgccagag gacagggtca ctgtgtccaa gagtgtcttc tccacggggc
2521tgacagaggc cgatgaagca tccgtgtttg tggtgggcac cgtgctctac aggaacctgg
2581gcagcttcct ggccctgcag aggaacacga ccgtcctgaa ttctaaggtg atctccgtga
2641ctgtgaaacc cccgcctcgc tccctgcgca cacccttgga gatcgagttt gcccacatgt
2701ataatggcac caccaaccag acctgtatcc tgtgggatga gacggatgta ccctcctcct
2761ccgccccccc gcagctcggg ccctggtcgt ggcgcggctg ccgcacggtg cccctcgacg
2821ccctccggac gcgctgcctc tgtgaccggc tctccacctt cgccatctta gcccagctca
2881gcgccgacgc gaacatggag aaggcgactc tgccgtcggt gacgctcatc gtgggctgtg
2941gcgtgtcctc tctcaccctg ctcatgctgg tcatcatcta cgtgtccgtg tggaggtaca
3001ttcgctcaga gcgttctgtc atcctcatca acttctgcct gtccatcatc tcctccaatg
3061ccctcatcct catcgggcag acccagaccc gcaacaaggt ggtgtgcacg ctggtggccg
3121ccttcctgca cttcttcttc ctgtcctcct tctgctgggt gctcaccgag gcctggcagt
3181cctacatggc cgtgacgggc cacctccgga accgcctcat ccgcaagcgc ttcctctgcc
3241tgggctgggg gctccctgca ctggttgtgg ccatttctgt gggattcacc aaggccaaag
3301ggtacagcac catgaactac tgctggctct ccctggaggg gggactgctc tatgccttcg
3361tgggacctgc cgctgccgtt gtgctggtga acatggtcat tgggatcctg gtgttcaaca
3421agctcgtgtc caaagacggc atcacggaca agaagctgaa ggagcgggca ggggcctccc
3481tgtggagctc ctgcgtggtg ctgccgctgc tggcgctgac ctggatgtcg gctgtgctcg
3541ccgtcaccga ccgccgctcc gccctcttcc agatcctctt cgctgtcttc gactcgctgg
3601agggcttcgt catcgtcatg gtgcactgta tcctccgtag agaggtccag gacgctgtga
3661aatgccgtgt ggttgaccgg caggaggagg gcaacgggga ctcagggggc tccttccaga
3721acggccacgc ccagctcatg accgacttcg agaaggacgt ggatctggcc tgtagatcag
3781tgctgaacaa ggacatcgcg gcctgccgca ctgccaccat cacgggcaca ctgaagcggc
3841cgtctctgcc cgaggaggag aagctgaagc tggcccatgc caaggggccg cccaccaatt
3901tcaacagcct gccggccaac gtgtccaagc tgcacctgca cggctcaccc cgctatcccg
3961gcgggcccct gcccgacttc cccaaccact cactgaccct caagagggac aaggcgccca
4021agtcctccTT CGTCGGTGAC GGGGACATCT TCAAGAAGCT GGACTCGGAT CTGAGCCGGG
4081CCCAGGAGAA GGCTCTGGAC ACGAGCTACG TGATCCTGCC CACGGCCACG GCCACGCTGC
4141GGCCCAAGCC CAAGGAGGAG CCCAAGTACA GCATCCACAT TGACCAGATG CCGCAGACCC
4201GCCTCATCCA CCTCAGCAGC CCCTGCCCCC ACCGCCCAAT CTGGAGCCGG CACCCCCCAG
4261CCTGGGGGAT CCCGGGGAGC CTGCCGCCCA TCCGGGACCC AGCACGGGGC CCAGCACCAA
4321GAACGAGAAT GTCGCCACCT TGTCTGGACC CAGCTTTCTT GTACAAAGTG GTTGATATCG
4381GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
4441AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GATCATACGT
4501CGTTGTAGGA GTTGAGACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
4561aagatt

Download FASTA (ORF) (Full)