Construct: ORF TRCN0000491494

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021864.2_s317c1
DNA Barcode:
CCGTCTGTTACTCGGGCCCATTAG
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
KYAT1 (883)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491494
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 883 KYAT1 kynurenine aminotransferase 1 NM_001122671.1 100% 100%
2 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352988.1 100% 100%
3 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352989.1 100% 100%
4 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352990.1 100% 100%
5 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352991.1 100% 100%
6 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352992.1 100% 100%
7 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352993.1 100% 100%
8 human 883 KYAT1 kynurenine aminotransferase 1 NM_004059.5 100% 100%
9 human 883 KYAT1 kynurenine aminotransferase 1 XM_011519168.1 100% 100%
10 human 883 KYAT1 kynurenine aminotransferase 1 XM_011519169.1 100% 100%
11 human 883 KYAT1 kynurenine aminotransferase 1 XM_011519170.2 100% 100%
12 human 883 KYAT1 kynurenine aminotransferase 1 XM_017015265.1 100% 100%
13 human 883 KYAT1 kynurenine aminotransferase 1 XM_017015267.1 100% 100%
14 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352997.1 92.5% 92.5% 1_102del
15 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352998.1 92.5% 92.5% 1_102del
16 human 883 KYAT1 kynurenine aminotransferase 1 XM_011519167.3 89.9% 89.9% 1_141del
17 human 883 KYAT1 kynurenine aminotransferase 1 NM_001122672.1 88.1% 88.1% 201_202ins150
18 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352999.1 86.2% 86.2% 0_1ins174
19 human 883 KYAT1 kynurenine aminotransferase 1 XM_024447709.1 86.2% 86.2% 0_1ins174
20 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352995.1 81.9% 81.9% 1_279del
21 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352996.1 81.9% 81.9% 1_279del
22 human 883 KYAT1 kynurenine aminotransferase 1 NM_001287390.2 81.7% 81.7% 1_282del
23 human 883 KYAT1 kynurenine aminotransferase 1 NM_001352994.1 81.7% 81.7% 1_282del
24 human 883 KYAT1 kynurenine aminotransferase 1 XM_017015262.1 81.7% 81.7% 1_282del
25 human 883 KYAT1 kynurenine aminotransferase 1 XM_017015260.1 79.7% 79.7% 1_321del
26 human 883 KYAT1 kynurenine aminotransferase 1 NR_109829.2 64.6% 1_185del;873_904del;1484_1957del
27 human 883 KYAT1 kynurenine aminotransferase 1 NR_148224.1 48.4% 1_185del;1306_1993del;2140_2613del
28 human 883 KYAT1 kynurenine aminotransferase 1 NR_148225.1 42.1% (many diffs)
29 mouse 70266 Kyat1 kynurenine aminotransferase 1 XR_001783176.1 32.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1335
ORF length:
1266
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat ggccaaacag ctgcaggccc gaaggctaga cgggatcgac tacaacccct
121gggtggagtt tgtgaaactg gccagtgagc atgacgtcgt gaacttgggc cagggcttcc
181cggatttccc accaccagac tttgccgtgg aagcctttca gcacgctgtc agtggagact
241tcatgcttaa ccagtacacc aagacatttg gttacccacc actgacgaag atcctggcaa
301gtttctttgg ggagctgctg ggtcaggaga tagacccgct caggaatgtg ctggtgactg
361ttggtggcta tggggccctg ttcacagcct tccaggccct ggtggacgaa ggagacgagg
421tcatcatcat cgaacccttt tttgactgct acgagcccat gacaatgatg gcagggggtc
481gtcctgtgtt tgtgtccctg aagccgggtc ccatccagaa tggagaactg ggttccagca
541gcaactggca gctggacccc atggagctgg ccggcaaatt cacatcacgc accaaagccc
601tggtcctcaa cacccccaac aaccccctgg gcaaggtgtt ctccagggaa gagctggagc
661tggtggccag cctttgccag cagcatgacg tggtgtgtat cactgatgaa gtctaccagt
721ggatggtcta cgacgggcac cagcacatca gcattgccag cctccctggc atgtgggaac
781ggaccctgac catcggcagc gccggcaaga ccttcagcgc cactggctgg aaggtgggct
841gggtcctggg tccagatcac atcatgaagc acctgcggac cgtgcaccag aactccgtct
901tccactgccc cacgcagagc caggctgcag tagccgagag ctttgaacgg gagcagctgc
961tcttccgcca acccagcagc TACTTTGTGC AGTTCCCGCA GGCCATGCAG CGCTGCCGTG
1021ACCACATGAT ACGTAGCCTA CAGTCAGTGG GCCTGAAGCC CATCATCCCT CAGGGCAGCT
1081ACTTCCTCAT CACAGACATC TCAGACTTCA AGAGGAAGAT GCCTGACTTG CCTGGAGCTG
1141TGGATGAGCC CTATGACAGA CGCTTCGTCA AGTGGATGAT CAAGAACAAG GGCTTGGTGG
1201CCATCCCTGT CTCCATCTTC TATAGTGTGC CACATCAGAA GCACTTTGAC CACTATATCC
1261GCTTCTGTTT TGTGAAGGAT GAAGCCACGC TCCAGGCCAT GGACGAGAAG CTGCGGAAGT
1321GGAAGGTGGA ACTCTAGGAC CCAGCTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1381TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1441GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGACCGTCTG TTACTCGGGC
1501CCATTAGACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

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