Construct: ORF TRCN0000491666

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019839.2_s317c1
DNA Barcode:
ACGCCATGAGATTTACAGCCTAGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ALPK1 (80216)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491666
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80216 ALPK1 alpha kinase 1 NM_001102406.2 99.9% 99.9% 318T>C;3732_3733insG
2 human 80216 ALPK1 alpha kinase 1 NM_025144.4 99.9% 99.9% 318T>C;3732_3733insG
3 human 80216 ALPK1 alpha kinase 1 NM_001253884.1 93.6% 92.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3804
ORF length:
3735
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat gaataatcaa aaagtggtag ctgtgctact gcaagagtgc aagcaagtgc
121tggatcagct cttgttggaa gcgccagatg tgtcggaaga ggacaagagc gaggaccagc
181gctgcagagc tttactcccc agcgagttaa ggaccctgat ccaggaggca aaggaaatga
241agtggccctt cgtgcctgaa aagtggcagt acaaacaagc cgtgggccca gaggacaaaa
301caaacctgaa ggatgtgatt ggcgccgggt tgcagcagtt actggcgtcc ctgagggcct
361ccatcctcgc tcgggactgt gcggccgcgg cggctattgt gttcttggtg gaccggttcc
421tgtatgggct cgacgtctct ggaaaacttc tgcaggtcgc caaaggtctc cacaagttgc
481agccagccac gccaattgcc ccgcaggtgg ttattcgcca agcccgaatc tccgtgaact
541caggaaaact tttaaaagca gagtatattc tgagcagtct aataagcaac aatggagcaa
601cgggtacctg gctgtacaga aatgaaagtg acaaggtcct ggtgcagtcg gtctgtatac
661agatcagagg gcagattctg caaaagctgg ggatgtggta cgaagcagca gagttaatat
721gggcctccat tgtaggatat ttggcacttc ctcagccgga taaaaagggc ctctccacgt
781cgctaggtat actggcagac atctttgttt ccatgagcaa gaacgattat gaaaagttta
841aaaacaatcc acaaattaat ttgagcctgc tgaaggagtt tgaccaccat ttgctgtccg
901ctgcagaagc ctgcaagctg gcagctgcct tcagtgccta tacgccgctc ttcgtgctca
961cagctgtgaa tatccgtggc acgtgtttat tgtcctacag tagttcaaat gactgtcctc
1021cagaattgaa aaacttacat ctgtgtgaag ccaaagaggc ctttgagatt ggcctcctca
1081ccaagagaga tgatgagcct gttactggaa aacaggagct tcacagcttt gtcaaagctg
1141ctttcggtct caccacagtg cacagaaggc tccatgggga gacagggacg gtccatgcag
1201caagtcagct ctgtaaggaa gcaatgggga agctgtacaa tttcagcact tcctccagaa
1261gtcaggacag agaagctctg tctcaagaag ttatgtctgt gattgcccag gtgaaggaac
1321atttacaagt tcaaagcttc tcaaatgtag atgacagatc ttatgttccc gagagtttcg
1381agtgcaggtt ggataaactt atcttgcatg ggcaagggga tttccaaaaa atccttgaca
1441cctattcaca gcaccatact tcggtgtgtg aagtatttga aagtgattgt ggaaacaaca
1501aaaatgaaca gaaagatgca aaaacaggag tctgcatcac tgctctaaaa acagaaataa
1561aaaacataga tactgtgagt actactcaag aaaagccaca ttgtcaaaga gacacaggaa
1621tatcttcctc cctaatgggt aagaatgttc agagggaact cagaagggga ggaaggagaa
1681actggaccca ttctgatgca tttcgagtct ccttggatca agatgtggag actgagactg
1741agccatcgga ctacagcaat ggtgagggag ctgttttcaa caagtctctg agtggcagcc
1801agacttccag tgcttggagc aacttatcag ggtttagttc ctctgcaagc tgggaggaag
1861tgaattatca cgttgacgac aggtcagcca gaaaagagcc tggcaaagaa catctggtgg
1921acactcagtg ttccactgcc ttgtctgagg agctagagaa tgacagggaa ggcagagcta
1981tgcattcatt gcattcacag cttcatgatc tctctcttca ggaacccaac aatgacaatt
2041tggagccttc tcaaaatcag ccacagcaac agatgccctt gacacccttc tcgcctcata
2101ataccccagg cattttcttg gcccctggtg cagggcttct agaaggagct ccagaaggta
2161tccaggaagt cagaaatatg ggacccagaa atacttctgc tcactccaga ccctcatatc
2221gttctgcttc ttggtcttct gattctggta ggcccaagaa tatgggcaca catccttcag
2281tccaaaaaga agaagccttt gaaataattg ttgagtttcc agaaaccaac tgcgatgtca
2341aagacaggca ggggaaagag cagggagaag aaattagtga aagaggcgca ggccctacat
2401ttaaagctag tccctcctgg gttgacccag aaggagaaac agcagaaagc actgaagatg
2461cacccttaga ctttcacagg gtcctgcaca attctctggg aaacatttcc atgctgccat
2521gtagctcctt cacccctaat tggcctgttc aaaatcctga ctccagaaaa agtggtggcc
2581cagtcgcaga gcagggcatc gaccctgatg cctccacagt ggatgaggag gggcaactgc
2641tcgacagcat ggatgttccc tgcacaaatg ggcacggctc tcatagactg tgcattctga
2701gacagccgcc tggtcagagg gcggagaccc ccaattcctc tgtaagcggt aacatcctct
2761tccctgtcct cagcgaggac tgcactacca cagaggaagg aaatcagcct ggaaacatgc
2821taaactgcag ccagaactcc agctcatcct cagtgtggtg gctgaaatca cctgcatttt
2881ccagtggttc ttctgagggg gacagccctt ggtcctatct gaattccagt gggagttctt
2941gggtttcatt gccgggaaag atgaggaaag agatccttga ggctcgcacc ttgcaacctg
3001atgactttga aaagctgttg gcaggagtga ggcatgattg gctgtttcag agactagaga
3061atacgggggt ttttaagccc agtcaactcc accgagcaca tagtgctctt ttgttaaaat
3121attcaaaaaa atctgaactg tggacggccc aggaaactat tgtctatttg ggggactact
3181tgactgtgaa gaaaaaaggc agacaaagaa atgctttttg ggttcatcat cttcatcaag
3241aagaaattct ggggaggtat gttgggaaag actataagga gcagaagggg ctctggcacc
3301acttcactga tgtggagcga cagatgaccg cacagcacta tgtgacagaa tttaacaaga
3361gactctatga acaaaacatt ccCACCCAGA TATTCTACAT CCCATCCACA ATACTACTGA
3421TTTTAGAGGA CAAGACAATA AAGGGATGTA TCAGTGTGGA GCCTTACATA CTGGGAGAAT
3481TTGTAAAATT GTCAAATAAC ACGAAAGTGG TGAAAACAGA ATACAAAGCC ACAGAATATG
3541GCTTGGCCTA TGGCCATTTT TCTTATGAGT TTTCTAATCA TAGAGATGTT GTGGTCGATT
3601TACAAGGTTG GGTAACCGGT AATGGAAAAG GACTCATCTA CCTCACAGAT CCCCAGATTC
3661ACTCCGTTGA TCAGAAAGTT TTCACTACCA ATTTTGGAAA GAGAGGAATT TTTTACTTCT
3721TTAATAACCA GCATGTGGAA TGTAATGAAA TCTGCCATCG TCTTTCTTTG ACTAGACCTT
3781CAATGGAGAA ACCATGCACA GACCCAGCTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
3841CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
3901AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAACGC CATGAGATTT
3961ACAGCCTAGG ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)