Construct: ORF TRCN0000491785

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007790.1_s317c1
Derived from:
ccsbBroadEn_03858
DNA Barcode:
AGACTTCGCCCGACGGAGCAGGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SRPRB (58477)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491785
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 58477 SRPRB SRP receptor subunit beta NM_021203.4 100% 100%
2 human 58477 SRPRB SRP receptor subunit beta NR_163491.1 19.8% 1_34del;848_4087del
3 mouse 20818 Srprb signal recognition particle... NM_009275.4 85.1% 90.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
879
ORF length:
813
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ttccgcggac tcgcgccggg tggcagatgg cggcggtgcc gggggcacct
121tccagcccta cctagacacc ttgcggcagg agctgcagca gacggaccca acgctgttgt
181cagtagtggt ggcggttctt gcggtgctgc tgacgctagt cttctggaag ttaatccgga
241gcagaaggag cagtcagaga gctgttcttc ttgttggcct ttgtgattcc gggaaaacgt
301tgctctttgt caggttgtta acaggccttt atagagacac tcagacgtcc attactgaca
361gctgtgctgt atacagagtc aacaataaca ggggcaatag tctgaccttg attgaccttc
421ccggccatga gagtttgagg cttcagttct tagagcggtt taagtcttca gccagggcta
481ttgtgtttgt tgtggatagt gcagcattcc agcgagaggt gaaagatgtg gctgagtttc
541tgtatcaagt cctcattgac agtatgggtc tgaagaatac accatcattc ttaatagccT
601GCAATAAGCA AGATATTGCA ATGGCAAAAT CAGCAAAGTT AATTCAACAG CAGCTGGAGA
661AAGAACTCAA CACCTTACGA GTTACCCGTT CTGCTGCCCC CAGCACACTG GACAGTTCCA
721GCACTGCCCC TGCTCAGCTG GGGAAGAAAG GCAAAGAGTT TGAATTCTCA CAGTTGCCCC
781TCAAAGTGGA GTTCCTGGAG TGCAGTGCCA AGGGTGGAAG AGGGGACGTG GGCTCTGCTG
841ACATCCAGGA CTTGGAGAAA TGGCTGGCTA AAATTGCCTG CCCAACTTTC TTGTACAAAG
901TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
961GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1021ACGAAGACTT CGCCCGACGG AGCAGGACAC GCGTTAAGTC gacaatcaac ctctggatta
1081caaaatttgt gaaagatt

Download FASTA (ORF) (Full)