Construct: ORF TRCN0000491886

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000726.1_s317c1
Derived from:
ccsbBroadEn_07151
DNA Barcode:
TGCGAATCCTCAAAGTTTCCCCTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF18 (7566)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491886
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7566 ZNF18 zinc finger protein 18 NM_001303281.2 99.8% 99.6% 629A>G;720G>C
2 human 7566 ZNF18 zinc finger protein 18 NM_144680.3 99.8% 99.6% 629A>G;720G>C
3 human 7566 ZNF18 zinc finger protein 18 XM_011524002.3 99.8% 99.6% 629A>G;720G>C
4 human 7566 ZNF18 zinc finger protein 18 XM_017025006.2 99.8% 99.6% 629A>G;720G>C
5 human 7566 ZNF18 zinc finger protein 18 XM_017025007.2 99.8% 99.6% 629A>G;720G>C
6 human 7566 ZNF18 zinc finger protein 18 XM_024450909.1 99.8% 99.6% 629A>G;720G>C
7 human 7566 ZNF18 zinc finger protein 18 XM_024450910.1 99.8% 99.6% 629A>G;720G>C
8 human 7566 ZNF18 zinc finger protein 18 XM_024450911.1 99.8% 99.6% 629A>G;720G>C
9 human 7566 ZNF18 zinc finger protein 18 XM_024450913.1 99.8% 99.6% 629A>G;720G>C
10 human 7566 ZNF18 zinc finger protein 18 NM_001303282.1 99.6% 99.4% 629A>G;720G>C;749_750insAGC
11 human 7566 ZNF18 zinc finger protein 18 XM_017025008.2 99.6% 99.4% 629A>G;720G>C;749_750insAGC
12 human 7566 ZNF18 zinc finger protein 18 XM_017025010.2 99.6% 99.4% 629A>G;720G>C;749_750insAGC
13 human 7566 ZNF18 zinc finger protein 18 XM_017025011.2 99.6% 99.4% 629A>G;720G>C;749_750insAGC
14 human 7566 ZNF18 zinc finger protein 18 XM_024450914.1 53% 51.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1713
ORF length:
1647
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc cgttgacttg gggcaggccc taggcctgct gccatcgctg gcgaaggccg
121aggactccca gttctcagaa tcagatgctg cccttcaaga ggaactctcc agccctgaga
181ccgcacgcca gcttttcagg cagttccgtt accaggtgat gtctgggcct catgagacct
241tgaagcaact tcggaagctc tgtttccagt ggctacagcc agaggttcac accaaagagc
301agatcctaga gatcctcatg ttggagcagt ttctgaccat cctgcctggg gagatccaga
361tgtgggtgcg gaaacagtgt ccaggaagtg gagaagaggc agtgaccctt gtggaaagct
421tgaaggggga cccccagaga ctgtggcaat ggatcagtat ccaggttcta ggacaggaca
481tcttatcaga gaagatggaa tctccaagct gccaagtggg ggaagtggag ccccatcttg
541aagtggtgcc tcaggagttg ggacttgaga attcatcctc agggcctggg gagcttctga
601gccacatcgt gaaagaggaa tctgacacag aagcagaact agccctggct gcctcccagc
661ctgcccgact ggaggaaagg ctgatcagag accgggacct cggagcctca ctgctcccag
721cagcacctca ggaacagtgg agacaactgg attccactca aaaggagcaa tactgggatc
781tcatcctgga gacctatggg aaaatggtct caggagcagg catttcccat cccaaatctg
841acctgactaa ttcaatagaa tttggggaag agctggcagg aatatacctt catgtcaatg
901agaagatccc aagacccacc tgcataggag atagacaaga gaatgacaag gagaacctaa
961atttggagaa tcacagggac caggagctcc tgcatgcttc ctgtcaagct tcaggagagg
1021ttccttctca ggcttccttg aggggcttct tcactgagga tgagccagga tgctttggag
1081aaggagagaa tctccctgag gctctgcaaa acattcagga tgagggaaca ggggaacagc
1141tgtctcctca agaaaggatt tctgagaaac aactaggtca gcatttgcct aatcctcatt
1201caggagaaat gtccaccatg tggcttgagg agaagagaga gacctcccag aaggggcagc
1261caagagcccc catggcccag aagctcccca cctgcaggga gtgtgggaag accttttata
1321ggaattcTCA GCTTATTTTT CACCAAAGAA CTCACACCGG AGAGACATAC TTTCAGTGCA
1381CCATCTGCAA AAAAGCCTTT CTGCGGAGTT CAGACTTTGT GAAGCATCAG AGAACTCACA
1441CGGGAGAGAA GCCCTGTAAA TGTGATTACT GTGGGAAAGG CTTTAGTGAC TTCTCAGGAT
1501TGCGCCACCA CGAGAAAATC CACACAGGAG AGAAACCCTA TAAATGTCCT ATCTGTGAGA
1561AAAGTTTCAT TCAGAGATCA AACTTTAATA GACATCAGAG GGTTCACACT GGAGAGAAAC
1621CTTATAAATG TTCGCACTGT GGGAAAAGTT TCAGCTGGAG CTCGAGCCTT GACAAACATC
1681AAAGATCCCA CTTAGGAAAG AAGCCCTTTC AATGCCCAAC TTTCTTGTAC AAAGTGGTTG
1741ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1801GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATG
1861CGAATCCTCA AAGTTTCCCC TTACGCGTTA AGTCgacaat caacctctgg attacaaaat
1921ttgtgaaaga tt

Download FASTA (ORF) (Full)