Construct: ORF ccsbBroad304_00052

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012150.1_s304c1, BRDN0000409514
Derived from:
ccsbBroadEn_00052
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ALDH3A2 (224)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00052
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001031806.2 100% 100%
2 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369136.1 100% 100%
3 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369137.1 100% 100%
4 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_000382.3 94.5% 94.6% 1444_1450delGCAGAATinsA;1452T>A;1455_1456ins75
5 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369138.1 94.5% 94.6% 1444_1450delGCAGAATinsA;1452T>A;1455_1456ins75
6 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369139.1 94.5% 94.6% 1444_1450delGCAGAATinsA;1452T>A;1455_1456ins75
7 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369146.1 82.1% 80.9% (many diffs)
8 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... XM_024450651.1 62% 62% 0_1ins579
9 human 224 ALDH3A2 aldehyde dehydrogenase 3 fa... NM_001369148.1 56.7% 56.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1590
ORF length:
1524
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga gctcgaagtc cggcgggtcc gacaggcgtt cctgtccggc cggtcgcgac
121ctctgcggtt tcggctgcag cagctggagg ccctgcggag gatggtgcag gagcgcgaga
181aggatatcct gacggccatc gccgccgacc tgtgcaagag tgaattcaat gtgtacagtc
241aggaagtcat tactgtcctt ggggaaattg attttatgct tgagaatctt cctgaatggg
301ttactgctaa accagttaag aagaacgtgc tcaccatgct ggatgaggcc tatattcagc
361cacagcctct gggagtggtg ctgataatcg gagcttggaa ttaccccttc gttctcacca
421ttcagccact gataggagcc atcgctgcag gaaatgctgt gattataaag ccttctgaac
481tgagtgaaaa tacagccaag atcttggcaa agcttctccc tcagtattta gaccaggatc
541tctatattgt tattaatggt ggtgttgagg aaaccacgga gctcctgaag cagcgatttg
601accacatttt ctatacggga aacactgcgg ttggcaaaat tgtcatggaa gctgctgcca
661agcatctgac ccctgtgact cttgaactgg gagggaaaag tccatgttat attgataaag
721attgtgacct ggacattgtt tgcagacgca taacctgggg aaaatacatg aattgtggcc
781aaacctgcat tgcacccgac tatattctct gtgaagcatc cctccaaaat caaattgtat
841ggaagattaa ggaaacagtg aaggaatttt atggagaaaa tataaaagag tctcctgatt
901atgaaaggat catcaatctt cgtcatttta agaggatact aagtttgctt gaaggacaaa
961agatagcttt tggtggggag actgatgagg ccacacgcta catagcccca acagtactta
1021ccgatgttga tcctaaaacc aaggtgatgc aagaagaaat ttttggacca attcttccaa
1081tagtgcctgt gaaaaatgta gatgaggcca taaatttcat aaatgaacgt gaaaagcctc
1141tggctcttta tgtattttcg cataaccata agctcatcaa acggatgatt gatgagacat
1201ccagtggagg tgtcacaggc aatgacgtca ttatgcactt cacgctcaac tctttcccat
1261ttggaggagt gggttccagt gggatgggag cttatcacgg aaaacatagt tttgatactt
1321tttctcatca gcgtccctgt ttattaaaaa gtttaaagag agaaggtgct aacaaactca
1381gatatcctcc caacagccag tcaaaggtgg attggggaaa attttttctc ttgaaacggt
1441tcaacaaaga aaaactcggt ctcctgttgc tcactttcct gggtattgta gccgctgtgc
1501ttgtcaagaa ataccaagct gtgctgagga gaaaggccct gttgattttt ctggtagttc
1561acagactgcg ttggtccagt aagcagagat gcccaacttt cttgtacaaa gtggttggta
1621agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1681ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)