Construct: ORF ccsbBroad304_00116

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018141.1_s304c1, BRDN0000405583
Derived from:
ccsbBroadEn_00116
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ASS1 (445)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00116
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 445 ASS1 argininosuccinate synthase 1 NM_000050.4 100% 100%
2 human 445 ASS1 argininosuccinate synthase 1 NM_054012.4 100% 100%
3 human 445 ASS1 argininosuccinate synthase 1 XM_005272200.3 100% 100%
4 human 445 ASS1 argininosuccinate synthase 1 XM_017014729.1 92.7% 92.7% 1_96del
5 human 445 ASS1 argininosuccinate synthase 1 XM_011518705.2 91.5% 91.5% 1_114del
6 mouse 11898 Ass1 argininosuccinate synthetase 1 NM_007494.3 89% 96.8% (many diffs)
7 mouse 432466 Gm5424 predicted gene 5424; argini... NR_002687.1 71.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1302
ORF length:
1236
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc cagcaaaggc tccgtggttc tggcctacag tggcggcctg gacacctcgt
121gcatcctcgt gtggctgaag gaacaaggct atgacgtcat tgcctatctg gccaacattg
181gccagaagga agacttcgag gaagccagga agaaggcact gaagcttggg gccaaaaagg
241tgttcattga ggatgtcagc agggagtttg tggaggagtt catctggccg gccatccagt
301ccagcgcact gtatgaggac cgctacctcc tgggcacctc tcttgccagg ccctgcatcg
361cccgcaaaca agtggaaatc gcccagcggg agggggccaa gtatgtgtcc cacggcgcca
421caggaaaggg gaacgatcag gtccggtttg agctcagctg ctactcactg gccccccaga
481taaaggtcat tgctccctgg aggatgcctg aattctacaa ccggttcaag ggccgcaatg
541acctgatgga gtacgcaaag caacacggga ttcccatccc ggtcactccc aagaacccgt
601ggagcatgga tgagaacctc atgcacatca gctacgaggc tggaatcctg gagaacccca
661agaaccaagc gcctccaggt ctctacacga agacccagga cccagccaaa gcccccaaca
721cccctgacat tctcgagatc gagttcaaaa aaggggtccc tgtgaaggtg accaacgtca
781aggatggcac cacccaccag acctccttgg agctcttcat gtacctgaac gaagtcgcgg
841gcaagcatgg cgtgggccgt attgacatcg tggagaaccg cttcattgga atgaagtccc
901gaggtatcta cgagacccca gcaggcacca tcctttacca tgctcattta gacatcgagg
961ccttcaccat ggaccgggaa gtgcgcaaaa tcaaacaagg cctgggcttg aaatttgctg
1021agctggtgta taccggtttc tggcacagcc ctgagtgtga atttgtccgc cactgcatcg
1081ccaagtccca ggagcgagtg gaagggaaag tgcaggtgtc cgtcctcaag ggccaggtgt
1141acatcctcgg ccgggagtcc ccactgtctc tctacaatga ggagctggtg agcatgaacg
1201tgcagggtga ttatgagcca actgatgcca ccgggttcat caacatcaat tccctcaggc
1261tgaaggaata tcatcgtctc cagagcaagg tcactgccaa atacccaact ttcttgtaca
1321aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1381ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)