Construct: ORF ccsbBroad304_00139

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002358.1_s304c1, BRDN0000408458
Derived from:
ccsbBroadEn_00139
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ATP6V1G2 (534)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00139
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 534 ATP6V1G2 ATPase H+ transporting V1 s... NM_130463.4 100% 100%
2 human 534 ATP6V1G2 ATPase H+ transporting V1 s... NM_001204078.2 66.1% 66.1% 100_101ins120
3 human 534 ATP6V1G2 ATPase H+ transporting V1 s... NM_138282.3 65.2% 65.2% 0_1ins123
4 mouse 66237 Atp6v1g2 ATPase, H+ transporting, ly... NM_023179.3 89.8% 94.9% (many diffs)
5 mouse 66237 Atp6v1g2 ATPase, H+ transporting, ly... NM_001347351.1 58.1% 61% (many diffs)
6 mouse 66237 Atp6v1g2 ATPase, H+ transporting, ly... XM_006524795.2 58.1% 61% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
423
ORF length:
354
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggccagtcag tcccaaggta tccagcagct tctgcaagct gagaagcggg
121cagctgagaa ggtggcagat gccagaaaga ggaaggcccg gcgactgaag caggcaaagg
181aggaggcaca gatggaggtg gagcaatacc gcagagagcg agagcacgaa ttccagagca
241agcagcaggc ggccatgggc tcccagggga acctgtctgc tgaggtggag caggctacaa
301ggcgccaggt gcagggcatg cagagctccc agcagagaaa ccgagagcgt gtcctggccc
361agcttcttgg catggtctgc gacgtcaggc cccaggtcca ccccaactac cggatttctg
421ccttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
481tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
541tctggatta

Download FASTA (ORF) (Full)