Construct: ORF ccsbBroad304_00408

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005922.1_s304c1, BRDN0000408553
Derived from:
ccsbBroadEn_00408
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYP2C9 (1559)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00408
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1559 CYP2C9 cytochrome P450 family 2 su... NM_000771.4 100% 100%
2 human 1557 CYP2C19 cytochrome P450 family 2 su... NM_000769.4 94.8% 91.4% (many diffs)
3 human 1562 CYP2C18 cytochrome P450 family 2 su... NM_000772.3 87.7% 81.8% (many diffs)
4 human 1558 CYP2C8 cytochrome P450 family 2 su... NM_000770.3 84.7% 77.9% (many diffs)
5 human 1562 CYP2C18 cytochrome P450 family 2 su... NM_001128925.2 78.5% 74% (many diffs)
6 human 1558 CYP2C8 cytochrome P450 family 2 su... NM_001198853.1 72.5% 67.1% (many diffs)
7 human 1558 CYP2C8 cytochrome P450 family 2 su... NM_001198855.1 72.5% 67.1% (many diffs)
8 human 1558 CYP2C8 cytochrome P450 family 2 su... NM_001198854.1 66.4% 61.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1539
ORF length:
1470
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggattctctt gtggtccttg tgctctgtct ctcatgtttg cttctccttt
121cactctggag acagagctct gggagaggaa aactccctcc tggccccact cctctcccag
181tgattggaaa tatcctacag ataggtatta aggacatcag caaatcctta accaatctct
241caaaggtcta tggccctgtg ttcactctgt attttggcct gaaacccata gtggtgctgc
301atggatatga agcagtgaag gaagccctga ttgatcttgg agaggagttt tctggaagag
361gcattttccc actggctgaa agagctaaca gaggatttgg aattgttttc agcaatggaa
421agaaatggaa ggagatccgg cgtttctccc tcatgacgct gcggaatttt gggatgggga
481agaggagcat tgaggaccgt gttcaagagg aagcccgctg ccttgtggag gagttgagaa
541aaaccaaggc ctcaccctgt gatcccactt tcatcctggg ctgtgctccc tgcaatgtga
601tctgctccat tattttccat aaacgttttg attataaaga tcagcaattt cttaacttaa
661tggaaaagtt gaatgaaaac atcaagattt tgagcagccc ctggatccag atctgcaata
721atttttctcc tatcattgat tacttcccgg gaactcacaa caaattactt aaaaacgttg
781cttttatgaa aagttatatt ttggaaaaag taaaagaaca ccaagaatca atggacatga
841acaaccctca ggactttatt gattgcttcc tgatgaaaat ggagaaggaa aagcacaacc
901aaccatctga atttactatt gaaagcttgg aaaacactgc agttgacttg tttggagctg
961ggacagagac gacaagcaca accctgagat atgctctcct tctcctgctg aagcacccag
1021aggtcacagc taaagtccag gaagagattg aacgtgtgat tggcagaaac cggagcccct
1081gcatgcaaga caggagccac atgccctaca cagatgctgt ggtgcacgag gtccagagat
1141acattgacct tctccccacc agcctgcccc atgcagtgac ctgtgacatt aaattcagaa
1201actatctcat tcccaagggc acaaccatat taatttccct gacttctgtg ctacatgaca
1261acaaagaatt tcccaaccca gagatgtttg accctcatca ctttctggat gaaggtggca
1321attttaagaa aagtaaatac ttcatgcctt tctcagcagg aaaacggatt tgtgtgggag
1381aagccctggc cggcatggag ctgtttttat tcctgacctc cattttacag aactttaacc
1441tgaaatctct ggttgaccca aagaaccttg acaccactcc agttgtcaat ggatttgcct
1501ctgtgccgcc cttctaccag ctgtgcttca ttcctgtctt gccaactttc ttgtacaaag
1561tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
1621gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)