Construct: ORF ccsbBroad304_00896

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002608.1_s304c1, BRDN0000407711
Derived from:
ccsbBroadEn_00896
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNJ12 (3768)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00896
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3768 KCNJ12 potassium inwardly rectifyi... NM_021012.5 100% 100%
2 human 3768 KCNJ12 potassium inwardly rectifyi... XM_005256625.5 100% 100%
3 human 3768 KCNJ12 potassium inwardly rectifyi... XM_011523831.2 100% 100%
4 human 100134444 KCNJ18 potassium inwardly rectifyi... NM_001194958.2 98.9% 98.6% (many diffs)
5 human 100134444 KCNJ18 potassium inwardly rectifyi... XM_005276919.3 80.1% 79.8% (many diffs)
6 mouse 16515 Kcnj12 potassium inwardly-rectifyi... NM_001267593.1 88.6% 96% (many diffs)
7 mouse 16515 Kcnj12 potassium inwardly-rectifyi... XM_006532318.3 88.6% 96% (many diffs)
8 mouse 16515 Kcnj12 potassium inwardly-rectifyi... NM_010603.6 71.7% 77.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1365
ORF length:
1299
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac cgcggccagc cgggccaacc cctacagcat cgtgtcatcg gaggaggacg
121ggctgcacct ggtcaccatg tcgggcgcca acggcttcgg caacggcaag gtgcacacgc
181ggcgcaggtg ccgcaaccgc ttcgtcaaga agaatggcca gtgcaacatt gagttcgcca
241acatggacga gaagtcacag cgctacctgg ctgacatgtt caccacctgt gtggacatcc
301gctggcggta catgctgctc atcttctcgc tggccttcct tgcctcctgg ctgctgttcg
361gcatcatctt ctgggtcatc gcggtggcac acggtgacct ggagccggct gagggccggg
421gccgcacacc ctgtgtgatg caggtgcacg gcttcatggc ggccttcctc ttctccatcg
481agacgcagac caccatcggc tacgggctgc gctgtgtgac ggaggagtgc ccggtggccg
541tcttcatggt ggtggcccag tccatcgtgg gctgcatcat cgactccttc atgattggtg
601ccatcatggc caagatggca aggcccaaga agcgggcaca gacgctgctg ttcagccaca
661acgccgtggt ggccctgcgt gacggcaagc tctgcctcat gtggcgtgtg ggtaacctgc
721gcaagagcca cattgtggag gcccatgtgc gcgcgcagct catcaagccg cgggtcaccg
781aggagggcga gtacatcccg ctggaccaga tcgacatcga tgtgggcttc gacaagggcc
841tggaccgcat ctttctggtg tcgcccatca ccatcttgca tgagattgac gaggccagcc
901cgctcttcgg catcagccgg caggacctgg agacggacga ctttgagatc gtggtcatcc
961tggaaggcat ggtggaggcc acagccatga ccacccaggc ccgcagctcc tacctggcca
1021atgagatcct gtggggtcac cgctttgagc ccgtgctctt cgaggagaag aaccagtaca
1081agattgacta ctcgcacttc cacaagacct atgaggtgcc ctctacgccc cgctgcagtg
1141cgaaggatct ggtagagaac aagttcctgc tgcccagcgc caactccttc tgctacgaga
1201acgagctggc cttcctgagc cgtgacgagg aggatgaggc ggacggagac caggacggcc
1261gaagccggga cggcctcagc ccccaggcca ggcatgactt tgacagactc caggctggcg
1321gcggggtcct ggagcagcgg ccctacagac gggagtcaga gatctgccca actttcttgt
1381acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1441gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)