Construct: ORF ccsbBroad304_01403

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013557.1_s304c1, BRDN0000408137
Derived from:
ccsbBroadEn_01403
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RLN2 (6019)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01403
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6019 RLN2 relaxin 2 NM_134441.3 100% 100%
2 human 6013 RLN1 relaxin 1 XM_024447637.1 90.4% 89.7% (many diffs)
3 human 6019 RLN2 relaxin 2 XM_024447646.1 90.4% 89.7% (many diffs)
4 human 6019 RLN2 relaxin 2 XM_024447647.1 90.4% 89.7% (many diffs)
5 human 6013 RLN1 relaxin 1 NM_006911.4 90.4% 82.1% (many diffs)
6 human 6013 RLN1 relaxin 1 XM_024447638.1 85.4% 85.4% 0_1ins81
7 human 6013 RLN1 relaxin 1 XM_017015007.1 66.3% 53.1% (many diffs)
8 human 6013 RLN1 relaxin 1 XM_017015008.1 61.1% 53.4% (many diffs)
9 human 6019 RLN2 relaxin 2 NM_001329191.1 54% 54% 0_1ins255
10 human 6013 RLN1 relaxin 1 XM_024447639.1 54% 54% 0_1ins255
11 human 6013 RLN1 relaxin 1 XM_024447640.1 54% 54% 0_1ins255
12 human 6013 RLN1 relaxin 1 XM_024447641.1 54% 54% 0_1ins255
13 human 6013 RLN1 relaxin 1 XM_017015010.1 48.1% 34.3% (many diffs)
14 human 6013 RLN1 relaxin 1 XM_024447642.1 46.5% 41% (many diffs)
15 human 6013 RLN1 relaxin 1 XM_024447643.1 46.5% 41% (many diffs)
16 human 6013 RLN1 relaxin 1 XM_024447644.1 46.5% 41% (many diffs)
17 human 6013 RLN1 relaxin 1 XM_024447645.1 46.5% 41% (many diffs)
18 human 6019 RLN2 relaxin 2 NM_005059.3 38.1% 41.8% 212_312del;351_352ins305
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
624
ORF length:
555
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcctcgcctg ttttttttcc acctgctagg agtctgttta ctactgaacc
121aattttccag agcagtcgcg gactcatgga tggaggaagt tattaaatta tgcggccgcg
181aattagttcg cgcgcagatt gccatttgcg gcatgagcac ctggagcaaa aggtctctga
241gccaggaaga tgctcctcag acacctagac cagtggcaga aattgtgcca tccttcatca
301acaaagatac agaaaccata aatatgatgt cagaatttgt tgctaatttg ccacaggagc
361tgaagttaac cctgtctgag atgcagccag cattaccaca gctacaacaa catgtacctg
421tattaaaaga ttccagtctt ctctttgaag aatttaagaa acttattcgc aatagacaaa
481gtgaagccgc agacagcagt ccttcagaat taaaatactt aggcttggat actcattctc
541gaaaaaagag acaactctac agtgcattgg ctaataaatg ttgccatgtt ggttgtacca
601aaagatctct tgctagattt tgcttgccaa ctttcttgta caaagtggtt ggtaagccta
661tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
721gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)