Construct: ORF ccsbBroad304_02223

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015256.1_s304c1, BRDN0000411354
Derived from:
ccsbBroadEn_02223
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DZIP3 (9666)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02223
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9666 DZIP3 DAZ interacting zinc finger... NM_014648.4 99.9% 100% 2907T>C
2 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247914.4 99.9% 100% 2907T>C
3 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247915.3 99.9% 100% 2907T>C
4 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247916.3 99.9% 100% 2907T>C
5 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247917.3 99.9% 100% 2907T>C
6 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247918.3 99.9% 100% 2907T>C
7 human 9666 DZIP3 DAZ interacting zinc finger... XM_017007540.1 99.9% 100% 2907T>C
8 human 9666 DZIP3 DAZ interacting zinc finger... XM_005247919.4 82.9% 82.9% 1138_1139ins618;2289T>C
9 human 9666 DZIP3 DAZ interacting zinc finger... XR_924222.2 73.6% (many diffs)
10 human 9666 DZIP3 DAZ interacting zinc finger... XR_001740382.1 73.5% (many diffs)
11 mouse 224170 Dzip3 DAZ interacting protein 3, ... NM_001110017.1 85.9% 83.2% (many diffs)
12 mouse 224170 Dzip3 DAZ interacting protein 3, ... XM_006522089.1 83.5% 80.3% (many diffs)
13 mouse 224170 Dzip3 DAZ interacting protein 3, ... NM_027341.2 70.5% 67.1% (many diffs)
14 mouse 224170 Dzip3 DAZ interacting protein 3, ... XM_017316968.1 68.7% 67.4% (many diffs)
15 mouse 224170 Dzip3 DAZ interacting protein 3, ... XM_017316967.1 68.2% 64.2% (many diffs)
16 mouse 224170 Dzip3 DAZ interacting protein 3, ... XM_006522090.1 61.2% 58.9% (many diffs)
17 mouse 224170 Dzip3 DAZ interacting protein 3, ... XM_017316969.1 53.3% 51.2% (many diffs)
18 mouse 224170 Dzip3 DAZ interacting protein 3, ... XR_001781815.1 51.5% (many diffs)
19 mouse 224170 Dzip3 DAZ interacting protein 3, ... XR_001781814.1 42.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3690
ORF length:
3624
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ttctctacca gatgaatttt ttgtgaggca tcctgctgtg gaggatcaga
121ggaaggaaga aactgagaat aagctagaaa aatcatctgg tcaactgaac aaacaggaaa
181atgacatacc tactgatctt gtccctgtta acctactatt agaagtgaag aagttattaa
241atgcaattaa tactctacca aaaggtgtgg ttcctcacat taagaagttc ttacaagaag
301atttttcctt ccaaactatg cagagagaag ttgcagctaa cagccagaat ggtgaggaaa
361ttgttcctgc tttgacttta cgtttcttga ttacacagct agaagcagca cttaggaaca
421ttcaagctgg caattatacc gcacaccaga ttaatattgg ttattatttg acattactgt
481ttttatatgg agtagcactc actgaaagag gaaagaaaga ggattataca gaagctgaga
541ataaatttct ggtgatgaag atgatgatcc aagaaaatga aatttgtgaa aactttatgt
601ctttagttta ttttggacgt ggtttactgc gatgtgctca aaagagatat aatggaggac
661tgctagaatt tcataaaagc ttacaagaaa ttggagacaa aaatgaccat tggtttgaca
721tagatcctac agaagatgaa gatttaccta caacttttaa agatcttctt aataatttta
781tcaagacaac tgaaagcaat ataatgaagc agacgatttg tagttaccta gattgtgaac
841gatcttgtga agctgacatt ttgaagaaca ccagttataa gggatttttt cagttaatgt
901gcagtaaaag ttgctgtgtt tatttccata aaatttgctg gaaaaagttc aagaatttaa
961agtatccagg tgaaaatgat cagagtttta gtgggaaaaa atgtttgaag gaaggatgta
1021caggtgacat ggtaaggatg ctgcaatgtg atgtacctgg aattgttaaa attttgtttg
1081aagttgtgag aaaggatgaa tatatcacca ttgaaaattt aggagcaagt tatagaaagt
1141tgatatctct gaaaataact gatactgata taagaccgaa gatcagttta aaatttaata
1201caaaagatga aatgcctatc ttcaagcttg attataatta tttctatcat ctgcttcata
1261taattattat ttctggtact gacattgttc gacaaatatt tgatgaggct atgccacctc
1321ctcttttgaa aaaagagctt cttatacaca agaatgtgct ggaatcctac tacaaccatc
1381tttggaccaa tcatcctttg ggtggatcat ggcatctgct ttatcctcct aacaaggagt
1441taccgcaatc caaacagttt gacttatgcc tcctgttagc tcttataaaa catttaaatg
1501tgttccctgc acccaaaaaa ggatggaata tggaaccgcc atcttctgac atctctaaat
1561ctgcagacat cctgagactg tgcaaataca gggatatcct ccttagtgag attttgatga
1621atggtctcac tgagtcacag ttcaattcaa tttggaaaaa agtttcagat attcttctgc
1681gccttgggat gatgcaagag gatattgaca aagtgaagga gaatcccatt gagaatatct
1741cccttgatta ccatcagcta tctgtctacc taggcatacc agtaccagaa atcatacaga
1801ggatgttatc ctgctatcaa caaggaattg ctctacagtc aataacaggc agtcagcgta
1861ttgaaataga agagttacag aatgaggaag aagaactaag tccacctctc atggagtaca
1921atataaatgt gaaatcacac cctgagatac agtttgcaga aattaataaa gatgggacct
1981caatacccag tgaatcttca acagaatctc ttaaagatct ccaggaagtt aagagtaaac
2041aaaggaaaaa gaagaagact aagaataaaa agaataaaga ctcaaaagaa gaccaagtcc
2101catatgtggt agaaaaggaa gagcagttga ggaaagaaca agcaaatcca cactcagtca
2161gtagacttat aaaagatgat gcaagtgatg ttcaagagga ttctgcaatg gaagacaagt
2221tctatagcct ggatgaattg catattctgg acatgataga gcagggctca gctggcaaag
2281taactacaga ctatggagaa actgaaaagg aaaggcttgc tcgtcaaagg cagctttata
2341aattgcacta tcagtgtgaa gatttcaaaa gacagttgag aacagtgact tttcggtggc
2401aagaaaacca aatgcagatt aaaaagaaag acaaaattat cgcatctctt aatcaacaag
2461ttgcttttgg aatcaataag gtttccaaat tacagcgtca aatccatgct aaagataatg
2521aaatcaagaa ccttaaagag caactttcta tgaaaagatc tcagtgggaa atggaaaaac
2581ataatctgga aagcacaatg aaaacatacg taagcaaact gaacgcagaa actagcagag
2641ctttaacagc cgaggtgtat ttcttacagt gtcgtaggga ttttggtttg cttcatctag
2701agcagactga aaaggaatgt ctcaatcagc ttgccagggt gactcacatg gcagcaagca
2761acctagaatc acttcaatta aaggctgcgg tagacagttg gaatgccatt gtggcagatg
2821ttagaaacaa gattgcattc ctcaggacac agtacaatga acaaataaac aaagtcaagc
2881aaggatttgc cttgagtacc ttgcctccag tccagcttcc tcctccacca cccagtcctg
2941agatactgat gcagcagttc ttaggaagac cccttgtgaa agaatctttc tttagaccca
3001tacttactgt tcctcaaatg cctgcagttt gcccgggagt cgtctctgca actggccaac
3061ctagagcccc cctgatgact ggcatagcct gggctctgcc agcgcctgtg ggagacgctg
3121tgcctcccag tgcaggtctg cggagtgatc cctccatcat gaattgggag agaattacag
3181acaggctgaa aactgccttt ccacagcaaa ccagaaagga acttacagat ttcttacgga
3241aattgaagga tgcttatgga aaatccttgt ctgaactgac atttgatgaa attgtttgca
3301agatttccca gtttattgac cccaaaaagt ctcagagtca aggaaaatca gtgtcaaatg
3361ttaattgtgt ttcacctagt cattctccat cacagcctga tgctgcccag cccccaaaac
3421cagcctggag gccactcact tcacagggtc ctgccacatg ggaaggagcc agtaatccag
3481atgaggaaga ggaagaagaa gagccttgtg tgatctgtca tgagaatctg tctccagaaa
3541atctttcagt tttgccttgc gctcacaaat tccatgctca gtgcattaga ccatggttga
3601tgcaacaggg gacatgtcca acgtgcagac tccacgtttt gctaccagaa gaattccctg
3661gtcaccccag ccggcagttg cccaagatct gcccaacttt cttgtacaaa gtggttggta
3721agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
3781ggtggcgcgt taagtcgaca atcaacctct ggatta

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