Construct: ORF ccsbBroad304_02295

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017963.1_s304c1, BRDN0000407980
Derived from:
ccsbBroadEn_02295
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIGK (10026)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02295
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10026 PIGK phosphatidylinositol glycan... NM_005482.3 99.9% 100% 372C>T
2 mouse 329777 Pigk phosphatidylinositol glycan... NM_025662.5 83.4% 91.3% (many diffs)
3 mouse 329777 Pigk phosphatidylinositol glycan... NM_178016.3 74.6% 81.4% (many diffs)
4 mouse 329777 Pigk phosphatidylinositol glycan... XM_006501612.3 66.4% 74.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1251
ORF length:
1185
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cgtcaccgac agcctcagcc gggctgcgac tgtcttggca actgtgttgc
121tcttgtcctt cggcagcgtg gccgctagtc atatcgagga tcaagcagaa caattcttta
181gaagtggcca tacaaacaac tgggctgttc tggtgtgtac atcccgattc tggtttaatt
241atcgacatgt tgcaaatacc ctttctgttt atagaagtgt caagaggcta ggtattcctg
301acagtcacat tgtcctaatg cttgcagatg atatggcctg taatcctaga aatcccaaac
361cagctacagt gtttagtcac aagaatatgg aactaaatgt gtatggagat gatgtggaag
421tggattatag aagttatgag gtaactgtgg agaatttttt acgggtatta actgggagga
481tcccacctag tactcctcgg tcaaaacgtc ttctttctga tgacagaagc aatattctaa
541tttatatgac agggcatggt ggaaatggtt tcttaaaatt tcaagattct gaagaaatta
601ccaacataga actcgcggat gcttttgaac aaatgtggca gaaaagacgc tacaatgagc
661tactgtttat tattgatact tgccaaggag catccatgta tgaacgattt tattctccta
721acataatggc tctagctagt agtcaagtgg gagaagattc actctcgcat caacctgatc
781ctgcaattgg agtccatctt atggatagat acacatttta tgtcttggaa tttttggaag
841aaattaaccc agctagccaa actaatatga atgacctttt tcaggtatgt cccaaaagtc
901tgtgtgtgtc tactcctgga catcgcactg atctttttca gagggatcct aaaaatgtac
961tgataactga tttctttgga agtgtacgga aagtggaaat tacaacagag actattaaat
1021tgcaacagga ttcagaaatc atggaaagca gctataagga agaccagatg gatgagaaac
1081taatggaacc tctgaaatat gctgaacaac ttcctgtagc tcagataata caccagaaac
1141cgaagctgaa agactggcat cctcctgggg gctttattct gggattatgg gcacttatta
1201tcatggtttt cttcaaaact tatggaatta agcatatgaa gttcattttt tacccaactt
1261tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1321agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)