Construct: ORF ccsbBroad304_02446

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003587.1_s304c1, BRDN0000399008
Derived from:
ccsbBroadEn_02446
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TADA3 (10474)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02446
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10474 TADA3 transcriptional adaptor 3 NM_001278270.1 100% 100%
2 human 10474 TADA3 transcriptional adaptor 3 NM_006354.3 100% 100%
3 human 10474 TADA3 transcriptional adaptor 3 NM_133480.2 85.4% 85.4% 1107_1108ins189
4 human 10474 TADA3 transcriptional adaptor 3 NR_103488.1 51.4% (many diffs)
5 mouse 101206 Tada3 transcriptional adaptor 3 NM_133932.2 90.3% 99.3% (many diffs)
6 mouse 101206 Tada3 transcriptional adaptor 3 XM_006505238.3 88.7% 97.5% (many diffs)
7 mouse 101206 Tada3 transcriptional adaptor 3 XM_006505239.3 88.7% 97.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1362
ORF length:
1296
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag tgagttgaaa gactgcccct tgcagttcca cgacttcaag tctgtggatc
121acctgaaggt ctgtccccgc tacacggcag tgctggcacg ctctgaggat gatggcatcg
181gcatcgagga gctggacacc ctgcagctgg agctggagac cctgctgtct tctgccagcc
241ggcgcctgcg tgtgcttgag gccgaaaccc agatcctcac cgactggcag gataagaaag
301gtgacagacg attcctgaag ctgggtcgag accatgaact tggagctccc cccaaacatg
361ggaagcccaa gaagcagaaa ctggaaggga aggcaggaca tgggccgggc cctggcccag
421gacggcccaa atccaaaaac cttcagccca agatccagga atatgaattc actgatgacc
481ctatcgacgt gccacggatc cccaaaaatg atgcccccaa caggttctgg gcttcagtgg
541agccctactg tgctgacatc accagcgagg aggtccgcac acttgaggag ttactgaagc
601ccccagaaga tgaggctgag cattacaaga tcccacccct ggggaagcac tactcccagc
661gctgggccca ggaggacctg ctggaggagc agaaggatgg ggcccgggca gcggctgtgg
721ctgacaagaa gaaaggcctc atggggccac tgaccgaact ggacactaaa gatgtggatg
781ccctgctgaa gaagtctgag gcccagcatg aacagccgga agatggatgc ccctttggtg
841ccctgacgca gcgcctcctg caggccctgg tggaggaaaa tattatttcc cctatggagg
901attctcctat tcctgacatg tctgggaaag aatcaggggc tgacggggca agcacctccc
961ctcgcaatca gaacaagccc ttcagtgtgc cgcatactaa gtccctggag agccgcatca
1021aggaggagct aattgcccag ggccttttgg agtctgagga ccgccccgca gaggactccg
1081aggatgaggt ccttgctgag cttcgcaaac ggcaggctga gctgaaggca cttagtgccc
1141acaaccgcac caagaagcac gacctgctga ggctggcaaa ggaggaggtg agccggcagg
1201agctgaggca gcgggtgcgc atggctgaca acgaggtcat ggacgccttt cgcaagatca
1261tggctgcccg gcagaagaag cggactccca ccaagaaaga aaaggaccag gcctggaaga
1321ctctgaagga gcgtgagagc atcctgaagc tgctggatgg gtacccaact ttcttgtaca
1381aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1441ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)