Construct: ORF ccsbBroad304_02777

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013376.1_s304c1, BRDN0000410202
Derived from:
ccsbBroadEn_02777
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PES1 (23481)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02777
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23481 PES1 pescadillo ribosomal biogen... NM_014303.4 100% 100%
2 human 23481 PES1 pescadillo ribosomal biogen... XM_006724173.2 99.8% 99.8% 1517_1518insGAA
3 human 23481 PES1 pescadillo ribosomal biogen... NM_001243225.2 99.1% 99.1% 911_912insGGAGATGTCAGCGCA
4 human 23481 PES1 pescadillo ribosomal biogen... NM_001282327.1 76.3% 76.3% 0_1ins417
5 human 23481 PES1 pescadillo ribosomal biogen... NM_001282328.1 76.3% 76.3% 0_1ins417
6 human 23481 PES1 pescadillo ribosomal biogen... XM_017028678.1 76.3% 76.3% 0_1ins417
7 mouse 64934 Pes1 pescadillo ribosomal biogen... NM_022889.3 84.9% 89.1% (many diffs)
8 mouse 64934 Pes1 pescadillo ribosomal biogen... XM_017314702.1 82% 84.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1830
ORF length:
1764
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg aggccttgag aagaagaagt atgaacgagg ctcggccacc aactacatca
121cccggaacaa agcccggaag aagctccagc tgagcttggc tgactttagg cggctgtgca
181ttctgaaggg catttatccc catgaaccca aacacaagaa gaaggttaac aagggttcta
241cagcagcccg aacgttttac cttatcaaag acatcaggtt tctcctccac gaacccattg
301tcaacaagtt ccgtgaatac aaggtgttcg tccggaagct ccggaaggct tatgggaaga
361gcgagtggaa cactgtagag cgtttaaagg acaataagcc caactacaaa ctcgaccaca
421tcatcaagga acggtatccc acgttcatcg atgccctgcg ggacctggac gatgccctct
481ccatgtgctt cctgttttcc accttcccgc ggactggcaa gtgccacgtg cagaccattc
541agctgtgccg ccggctcact gtggagttca tgcactacat tatcgctgcc cgtgccctgc
601gcaaggtctt cctgtccatc aaaggcattt actaccaggc cgaggtactg gggcagccca
661tcgtgtggat cactccctat gccttctccc atgaccaccc gacagacgtg gactacaggg
721tcatggccac cttcaccgag ttctacacca cgctgctggg ctttgtcaac ttccgccttt
781accagttgct caacctccac tatcccccga agctcgaggg tcaggcccaa gcagaggcaa
841aggccggtga gggcacctac gcgttggact ccgagagttg tatggagaaa ctggcagccc
901tcagtgccag cctggcccgc gtggtggtgc ctgccacaga ggaggaggcc gaggtggatg
961agtttcccac cgatggggag atgtcagcgc aggaggaaga ccgcaggaag gagctggagg
1021cgcaggagaa gcacaagaag ctttttgagg gcctgaagtt cttcctgaac cgagaggtgc
1081cccgtgaggc cctggccttc atcatcagga gttttggtgg ggaagtgtcc tgggacaaat
1141ctttgtgcat tggggccacc tatgacgtca cagactcccg catcacccat cagattgtcg
1201accggcctgg gcagcagacc tcagtcattg gcaggtgcta cgtgcagccc cagtgggtgt
1261ttgactcagt gaacgccagg ctccttctcc ccgtggcaga gtacttctct ggggtgcagc
1321tgcccccaca cctttcaccc tttgtgaccg agaaggaagg agattacgtt ccacctgaga
1381agctgaagct gctggctctg cagcggggag aggacccagg aaacctgaat gagtcagaag
1441aggaggagga agaggacgac aacaacgaag gtgatggtga tgaagaggga gaaaatgagg
1501aggaggagga agatgcagag gctggttcag aaaaggagga agaggcccgg ctggcagccc
1561tggaagagca gaggatggag gggaagaagc ccagggtgat ggcaggcacc ttgaagctgg
1621aggataagca gcggctggcc caggaggagg agagtgaggc caagcgcctg gccattatga
1681tgatgaagaa gcgggagaag tacctgtacc agaagatcat gtttggcaag aggcgaaaaa
1741tccgagaggc caacaagctg gcggagaagc ggaaagccca cgatgaggcg gtgaggtctg
1801agaagaaggc caagaaggca aggccggagt gcccaacttt cttgtacaaa gtggttggta
1861agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1921ggtggcgcgt taagtcgaca atcaacctct ggatta

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