Construct: ORF ccsbBroad304_02830

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011828.1_s304c1, BRDN0000410831
Derived from:
ccsbBroadEn_02830
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SH3BP4 (23677)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02830
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23677 SH3BP4 SH3 domain binding protein 4 NM_001371302.1 100% 100%
2 human 23677 SH3BP4 SH3 domain binding protein 4 NM_001371303.1 100% 100%
3 human 23677 SH3BP4 SH3 domain binding protein 4 NM_001371304.1 100% 100%
4 human 23677 SH3BP4 SH3 domain binding protein 4 NM_001371305.1 100% 100%
5 human 23677 SH3BP4 SH3 domain binding protein 4 NM_001371306.1 100% 100%
6 human 23677 SH3BP4 SH3 domain binding protein 4 NM_014521.3 100% 100%
7 human 23677 SH3BP4 SH3 domain binding protein 4 XM_011510893.1 100% 100%
8 mouse 98402 Sh3bp4 SH3-domain binding protein 4 NM_133816.2 85.7% 91.5% (many diffs)
9 mouse 98402 Sh3bp4 SH3-domain binding protein 4 XM_006529975.3 85.7% 91.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2955
ORF length:
2889
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggctcagcgg atccgagcgg ccaactccaa tggcctccct cgctgcaagt
121cagaggggac cctgattgac ctgagcgaag ggttttcaga gacgagcttt aatgacatca
181aagtgccttc tcccagtgcc ttgctcgtag acaaccccac acctttcgga aatgcaaagg
241aagtgattgc gatcaaggac tattgcccca ccaacttcac cacactgaag ttctccaagg
301gcgaccatct ctacgtcttg gacacatctg gcggtgagtg gtggtacgca cacaacacca
361ccgaaatggg ctacatcccc tcctcctatg tgcagccctt gaactaccgg aactcaacac
421tgagtgacag cggtatgatt gataatcttc cagacagccc agacgaggta gccaaggagc
481tggagctgct cgggggatgg acagatgaca aaaaagtacc aggcagaatg tacagtaata
541accctttctg gaatggggtc cagaccaatc catttctgaa tgggaacgtg cccgtcatgc
601ccagcctgga tgagctgaat cccaaaagta ctgtggattt gctccttttt gacgcaggta
661catcctcctt caccgaatcc agctcagcca ccacgaatag cactggcaac atcttcgatg
721agcttccagt cacaaacgga ctccacgcag agccgccggt caggcgggac aaccccttct
781tcagaagcaa gcgctcctac agtctctcgg aactctccgt cctccaagcc aagtccgatg
841ctcccacatc gtcgagtttc ttcaccggct tgaaatcacc tgcccccgag caatttcaga
901gccgggagga ttttcgaact gcctggctaa accacaggaa gctggcccgg tcttgccacg
961acctggactt gcttggccaa agccctggtt ggggccagac ccaagccgtg gagacaaaca
1021tcgtgtgcaa gctggatagc tccgggggtg ctgtccagct tcctgacacc agcatcagca
1081tccacgtgcc cgagggccac gtcgcccctg gggagaccca gcagatctcc atgaaagccc
1141tgctggaccc cccgctggag ctcaacagtg acaggtcctg cagcatcagc cctgtgctgg
1201aggtcaagct gagcaacctg gaggtgaaaa cctctatcat cttggagatg aaagtgtcag
1261ccgagataaa aaatgacctt tttagcaaaa gcacagtggg cctccagtgc ctgaggagcg
1321actcgaagga agggccatat gtctccgtcc cgctcaactg cagctgtggg gacacggtcc
1381aggcacagct gcacaacctg gagccctgta tgtacgtggc tgtcgtggcc catggcccaa
1441gcatcctcta cccttccacc gtgtgggact tcatcaataa aaaagtcaca gtgggtctct
1501acggccctaa acacatccac ccatccttca agacggtagt gaccattttt gggcatgact
1561gtgccccaaa gacgctcctg gtcagcgagg tcacacgcca ggcacccaac cctgccccgg
1621tggccctgca gctgtggggg aagcaccagt tcgttttgtc caggccccag gatctcaagg
1681tctgtatgtt ttccaatatg acgaattacg aggtcaaagc cagcgagcag gccaaagtgg
1741tgcgaggatt ccagctgaag ctgggcaagg tgagccgcct gatcttcccc atcacctccc
1801agaaccccaa cgagctctct gacttcacgc tgcgggttca ggtgaaggac gaccaggagg
1861ccatcctcac ccagttttgt gtccagactc ctcagccacc ccctaaaagt gccatcaagc
1921cttccgggca aaggaggttt ctcaagaaga acgaagtcgg gaaaatcatc ctgtccccgt
1981ttgccaccac tacaaagtac ccgactttcc aggaccgccc ggtgtccagc ctcaagtttg
2041gtaagttgct caagactgtg gtgcggcaga acaagaacca ctacctgctg gagtacaaga
2101agggcgacgg gatcgccctg ctcagcgagg agcgggtcag gctccggggc cagctgtgga
2161ccaaggagtg gtacatcggc tactaccagg gcagggtggg cctcgtgcac accaagaacg
2221tgctggtggt cggcagggcc cggcccagcc tgtgctcggg ccccgagctg agcacctcgg
2281tgctgctgga gcagatcctg cggccctgca aattcctcac gtacatctat gcctccgtga
2341ggaccctgct catggagaac atcagcagct ggcgctcctt cgctgacgcc ctgggctacg
2401tgaacctgcc gctcaccttt ttctgccggg cagagctgga tagtgagccc gagcgggtgg
2461cgtccgtcct agaaaagctg aaggaggact gtaacaacac tgagaacaaa gaacggaagt
2521ccttccagaa ggagcttgtg atggccctac tgaagatgga ctgccagggc ctggtggtca
2581gactcatcca ggactttgtg ctcctgacca cggctgtaga ggtggcccag cgctggcggg
2641agctggctga gaagctggcc aaggtctcca agcagcagat ggacgcctac gagtctcccc
2701accgggacag gaacggggtt gtggacagcg aggccatgtg gaagcctgcg tatgacttct
2761tactcacctg gagccatcag atcggggaca gctaccggga tgtcatccag gagctgcacc
2821tgggcctgga caagatgaaa aaccccatca ccaagcgctg gaagcacctc actgggactc
2881tgatcttggt gaactccctg gacgttctga gagcagccgc cttcagccct gcggaccagg
2941acgacttcgt gatttgccca actttcttgt acaaagtggt tggtaagcct atccctaacc
3001ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
3061cgacaatcaa cctctggatt a

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