Construct: ORF ccsbBroad304_03119

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003666.1_s304c1, BRDN0000407055
Derived from:
ccsbBroadEn_03119
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDIP1 (29965)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03119
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29965 CDIP1 cell death inducing p53 tar... NM_001199054.2 100% 100%
2 human 29965 CDIP1 cell death inducing p53 tar... NM_013399.3 100% 100%
3 human 29965 CDIP1 cell death inducing p53 tar... NM_001199055.2 81.2% 81.2% 240_241ins117
4 human 29965 CDIP1 cell death inducing p53 tar... NM_001199056.2 62% 62% 118_119ins237
5 mouse 66626 Cdip1 cell death inducing Trp53 t... NM_025670.4 88.1% 94.2% (many diffs)
6 mouse 66626 Cdip1 cell death inducing Trp53 t... XM_006522467.1 88.1% 94.2% (many diffs)
7 mouse 66626 Cdip1 cell death inducing Trp53 t... XM_006522468.1 88.1% 94.2% (many diffs)
8 mouse 66626 Cdip1 cell death inducing Trp53 t... XM_011245996.2 88.1% 94.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
690
ORF length:
624
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc cagcgagcct ccccctcctt atcctggggg ccccacagcc ccacttctgg
121aagagaaaag tggagccccg cccaccccag gccgttcctc cccagctgtg atgcagcccc
181ctccaggcat gccactgccc cctgcggaca ttggcccccc accctatgag ccgccgggtc
241acccaatgcc ccagcctggc ttcatcccac cacacatgag tgcagatggc acctacatgc
301ctccgggttt ctaccctcct ccaggccccc acccacccat gggctactac cccccagggc
361cctacacgcc agggccctac cctggccctg ggggccacac agccacagtc ctggtccctt
421caggagctgc caccacggtg acagtgctgc agggagagat ctttgaggga gcgcctgtgc
481agacggtgtg tccccactgc cagcaggcca tcaccaccaa gatctcctac gagattggct
541tgatgaattt cgtgctgggt ttcttctgtt gcttcatggg atgtgatctg ggctgctgcc
601tgatcccctg cctcatcaat gacttcaagg atgtgacgca cacatgcccc agctgcaaag
661cctacatcta cacgtacaag cgcctgtgct anccaacttt cttgtacaaa gtggttggta
721agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
781ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)