Construct: ORF ccsbBroad304_03305

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012140.1_s304c1, BRDN0000409294
Derived from:
ccsbBroadEn_03305
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANAPC5 (51433)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03305
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51433 ANAPC5 anaphase promoting complex ... NM_016237.5 100% 100%
2 human 51433 ANAPC5 anaphase promoting complex ... NM_001330489.2 98.2% 98.2% 1121_1122ins39
3 human 51433 ANAPC5 anaphase promoting complex ... NM_001137559.1 85.1% 85.1% 0_1ins297;824_825ins39
4 human 51433 ANAPC5 anaphase promoting complex ... XM_017019423.2 47.2% 47.2% 0_1ins1194
5 human 51433 ANAPC5 anaphase promoting complex ... XM_017019424.2 47.2% 47.2% 0_1ins1194
6 mouse 59008 Anapc5 anaphase-promoting complex ... NM_021505.3 88.3% 92.8% (many diffs)
7 mouse 59008 Anapc5 anaphase-promoting complex ... NM_001289518.1 87.3% 91.7% (many diffs)
8 mouse 59008 Anapc5 anaphase-promoting complex ... NM_001289520.1 87.3% 91.7% (many diffs)
9 mouse 59008 Anapc5 anaphase-promoting complex ... NM_001042491.2 86.6% 91.1% (many diffs)
10 mouse 59008 Anapc5 anaphase-promoting complex ... NM_001289517.1 85.6% 90% (many diffs)
11 mouse 59008 Anapc5 anaphase-promoting complex ... XM_017321048.1 80.8% 84.2% (many diffs)
12 mouse 59008 Anapc5 anaphase-promoting complex ... NM_001289519.1 78.9% 71.5% (many diffs)
13 mouse 59008 Anapc5 anaphase-promoting complex ... XR_387575.1 75.7% (many diffs)
14 mouse 59008 Anapc5 anaphase-promoting complex ... XM_006530429.3 74.7% 64.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2331
ORF length:
2265
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cagcgtccac gagagcctct acttcaatcc catgatgacc aatggggttg
121tgcacgccaa tgtgttcggc atcaaggact gggtgacgcc gtacaagatc gcggtgctgg
181tgctgctgaa cgagatgagc cgcacaggcg agggcgccgt cagcctcatg gagcggcgga
241ggctcaacca gctgctcctg cccctgctgc agggcccaga tattacactg tcaaaacttt
301acaagttaat tgaagagtct tgtccacagc tggcaaattc agtgcagatc agaatcaaac
361tgatggctga aggcgagttg aaggatatgg aacagttttt tgatgacctt tcagattctt
421tctctggaac tgaaccagag gttcacaaaa caagtgtagt aggtttgttt ctgcgtcaca
481tgatcttggc ctacagtaag ctttctttca gccaagtgtt taaactgtac actgcccttc
541agcagtactt ccagaatggt gagaaaaaga cagtggagga tgctgatatg gaactgacca
601gtagagatga gggtgaaaga aaaatggaaa aagaagaact tgatgtatct gtaagagaag
661aggaggtatc ttgcagtggg cctctgtccc aaaaacaagc agaatttttt ctttctcaac
721aggcttcttt gctaaagaat gatgagacta aggccctcac tccagcttcc ttgcagaagg
781aattaaacaa tttgttgaaa tttaatcctg attttgctga agcgcattat ctcagctact
841taaacaacct ccgtgtccaa gatgttttca gttcaacaca cagtctcctc cattattttg
901atcgtctgat tcttaccgga gccgaaagca aaagtaatgg ggaagagggc tatggccgga
961gcttgagata cgccgctctg aatcttgccg ccctgcactg ccgcttcggt cactatcaac
1021aggcagagct cgccctgcag gaggcaatta ggattgccca ggagtccaac gatcacgtgt
1081gtctccagca ctgtttgagc tggctttatg tgctggggca gaagagatcc gatagctatg
1141ttctgctgga gcattctgtg aagaaggcag tacattttgg gttaccgtac ctcgcctccc
1201tgggaataca gtcccttgtt caacagagag cttttgctgg gaagacggca aacaagctga
1261tggatgccct aaaggactcc gacctcctgc actggaaaca cagcctgtca gagctcatcg
1321atatcagcat cgcacagaaa acggccatct ggaggctgta tggccgcagc accatggcac
1381tgcaacaggc ccagatgttg ctgagcatga acagcctgga ggcggtgaat gcgggcgtgc
1441agcagaacaa cacagagtcc tttgctgtcg cactctgcca cctcgcagag ctacacgcgg
1501agcagggctg ttttgctgca gcttctgaag tgttaaagca cttgaaggaa cgatttccgc
1561ctaatagtca gcacgcccag ttatggatgc tatgtgatca aaaaatacag tttgacagag
1621caatgaatga tggcaaatat catttggctg attcacttgt tacaggaatc acagctctca
1681atagcataga gggtgtttat aggaaagcgg ttgtattaca agctcagaac caaatgtcag
1741aggcacataa gcttttacaa aaattgttgg ttcattgtca gaaactgaag aacacagaaa
1801tggtgatcag tgtcctactg tccgtggcag agctgtactg gcgatcttcc tcccctacca
1861tcgcgctgcc catgctcctg caggctctgg ccctctccaa ggagtaccgg ttacagtact
1921tggcctctga aacagtgctg aacttggctt ttgcgcagct cattcttgga atcccagaac
1981aggccttaag tcttctccac atggccatcg agcccatctt ggctgacggg gctatcctgg
2041acaaaggtcg tgccatgttc ttagtggcca agtgccaggt ggcttcagca gcttcctacg
2101atcagccgaa gaaagcagaa gctctggagg ctgccatcga gaacctcaat gaagccaaga
2161actattttgc aaaggttgac tgcaaagagc gcatcaggga cgtcgtttac ttccaggcca
2221gactctacca taccctgggg aagacccagg agaggaaccg gtgtgcgatg ctcttccggc
2281agctgcatca ggagctgccc tctcatgggg tacccttgat aaaccatctc tacccaactt
2341tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
2401agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)