Construct: ORF ccsbBroad304_03358

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001440.1_s304c1, BRDN0000398741
Derived from:
ccsbBroadEn_03358
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MPC1 (51660)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03358
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51660 MPC1 mitochondrial pyruvate carr... NM_016098.4 100% 100%
2 human 51660 MPC1 mitochondrial pyruvate carr... NM_001270879.2 60.5% 60.5% 0_1ins129
3 human 51660 MPC1 mitochondrial pyruvate carr... XM_011535895.2 60.5% 60.5% 0_1ins129
4 human 51660 MPC1 mitochondrial pyruvate carr... XM_024446456.1 60.5% 60.5% 0_1ins129
5 human 51660 MPC1 mitochondrial pyruvate carr... NR_073093.2 28.8% 1_64del;140_368del;621_1133del
6 mouse 55951 Mpc1 mitochondrial pyruvate carr... NM_018819.4 90.2% 94.4% (many diffs)
7 mouse 55951 Mpc1 mitochondrial pyruvate carr... XM_011246219.2 71.3% 71.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
393
ORF length:
327
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gggcgcgttg gtgcggaaag cggcggacta tgtccgaagc aaggatttcc
121gggactacct catgagtacg cacttctggg gcccagtagc caactggggt cttcccattg
181ctgccatcaa tgatatgaaa aagtctccag agattatcag tgggcggatg acatttgccc
241tctgttgcta ttctttgaca ttcatgagat ttgcctacaa ggtacagcct cggaactggc
301ttctgtttgc atgccacgca acaaatgaag tagcccagct catccaggga gggcggctta
361tcaaacacga gatgactaaa acggcatctg catacccaac tttcttgtac aaagtggttg
421gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
481accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)

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