Construct: ORF ccsbBroad304_03525

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001889.1_s304c1, BRDN0000411480
Derived from:
ccsbBroadEn_03525
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
XKR8 (55113)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03525
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55113 XKR8 XK related 8 NM_018053.4 100% 100%
2 human 55113 XKR8 XK related 8 XM_011541680.3 79.8% 60.7% 0_1ins109;382_544del
3 human 55113 XKR8 XK related 8 XM_011541679.3 73.9% 51.9% 0_1ins109;382_652del
4 human 55113 XKR8 XK related 8 XR_946682.2 42.6% 1_513del;1004_1111del;1391_1392ins415
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1251
ORF length:
1185
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc ctggtcgtcc cgcggcgccc tccttcggga cctggtcctg ggcgtgctgg
121gcaccgccgc cttcctgctc gacctgggca ccgacctgtg ggccgccgtc cagtatgcgc
181tcggcggccg ctacctgtgg gcggcgctgg tgctggcgct gctgggcctg gcctccgtgg
241cgctgcagct cttcagctgg ctctggctgc gcgctgaccc tgccggcctg cacgggtcgc
301agcccccgcg ccgctgcctg gcgctgctgc atctcctgca gctgggttac ctgtacaggt
361gcgtgcagga gctgcggcag gggctgctgg tgtggcagca ggaggagccc tctgagtttg
421acttggccta cgccgacttc ctcgccctgg acatcagcat gctgcggctc ttcgagacct
481tcttggagac ggcaccacag ctcacgctgg tgctggccat catgctgcag agtggccggg
541ctgagtacta ccagtgggtt ggcatctgca catccttcct gggcatctcg tgggcactgc
601tcgactacca ccgggccttg cgcacctgcc tcccctccaa gccgctcctg ggcctgggct
661cctccgtgat ctacttcctg tggaacctgc tgctgctgtg gccccgagtc ctggctgtgg
721ccctgttctc agccctcttc cccagctatg tggccctgca cttcctgggc ctgtggctgg
781tactgctgct ctgggtctgg cttcagggca cagacttcat gccggacccc agctccgagt
841ggctgtaccg ggtgacggtg gccaccatcc tctatttctc ctggttcaac gtggctgagg
901gccgcacccg aggccgggcc atcatccact tcgccttcct cctgagtgac agcattctcc
961tggtggccac ctgggtgact catagctcct ggctgcccag cgggattcca ctgcagctgt
1021ggctgcctgt gggatgcggc tgcttctttc tgggcctggc tctgcggctt gtgtactacc
1081actggctgca ccctagctgc tgctggaagc ccgaccctga ccaggtagac ggggcccgga
1141gtctgctttc tccagagggg tatcagctgc ctcagaacag gcgcatgacc catttagcac
1201agaagttttt ccccaaggct aaggatgagg ctgcttcgcc agtgaaggga tacccaactt
1261tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1321agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)