Construct: ORF ccsbBroad304_03537

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016573.1_s304c1, BRDN0000399821
Derived from:
ccsbBroadEn_03537
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARMC1 (55156)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03537
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55156 ARMC1 armadillo repeat containing 1 NM_018120.6 100% 100%
2 human 55156 ARMC1 armadillo repeat containing 1 XM_017013605.2 100% 100%
3 human 55156 ARMC1 armadillo repeat containing 1 XM_005251264.2 86.1% 86.1% 464_465ins117
4 human 55156 ARMC1 armadillo repeat containing 1 NM_001286702.1 63.8% 47% 0_1ins116;159_160ins190
5 mouse 74252 Armc1 armadillo repeat containing 1 NM_028840.2 90% 98.2% (many diffs)
6 mouse 74252 Armc1 armadillo repeat containing 1 XM_006535556.1 88.4% 96% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
912
ORF length:
846
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa ttcttccact tccaccatga gtgaagagcc tgacgctcta tcggtagtta
121accagttacg ggatctagca gcagatccgt taaacagaag agccatcgtc caggatcagg
181gatgtctgcc tggccttatt ttatttatgg accatcccaa ccctccagtc gtccactccg
241ctttgcttgc tcttcgatac ttggcagaat gccgtgcaaa cagagaaaag atgaaaggag
301aactgggtat gatgttgagc ttacaaaatg ttatacagaa aactacaact ccaggagaaa
361caaaacttct ggcctctgaa atctatgaca ttcttcagtc ctccaatatg gcagatggtg
421atagttttaa tgagatgaat tcacgtcgaa ggaaagctca attttttctg ggaactacaa
481acaaacgtgc caaaacagtg gttttgcata tagatggcct tgatgatacg tctcggagaa
541atctatgtga agaggctttg ttaaaaatta aaggtgttat tagctttact tttcaaatgg
601ctgttcaaag gtgtgtggtg cgaatccgtt cagatttgaa agctgaggct ttggcatcag
661caatagcatc aaccaaggtt atgaaagctc agcaagttgt gaaaagtgaa agtggagaag
721agatgttggt cccattccaa gatactcctg tggaagttga acagaacaca gagctacctg
781actacctgcc tgaggatgag agtcccacaa aggaacagga caaagcggtg tcccgggtcg
841gctcacaccc agaaggtgga gctagctggc ttagcacagc tgcaaacttt ttatccagat
901cattttattg gtgcccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
961tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1021caatcaacct ctggatta

Download FASTA (ORF) (Full)