Construct: ORF ccsbBroad304_03721

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014822.1_s304c1, BRDN0000408186
Derived from:
ccsbBroadEn_03721
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CABP5 (56344)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03721
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56344 CABP5 calcium binding protein 5 NM_019855.5 99.8% 100% 238C>T
2 human 56344 CABP5 calcium binding protein 5 XM_017026992.1 60.5% 60.2% (many diffs)
3 mouse 29865 Cabp5 calcium binding protein 5 NM_013877.3 88.4% 93% (many diffs)
4 mouse 29865 Cabp5 calcium binding protein 5 XM_017322297.1 79.4% 80.9% (many diffs)
5 mouse 29865 Cabp5 calcium binding protein 5 XM_017322298.1 79.4% 80.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
588
ORF length:
519
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcagttcccc atgggccccg cctgcatctt cttgaggaaa ggcattgctg
121agaaacagcg ggaaagacca ctgggacaag atgagattga agagctgcgg gaagcatttc
181ttgagttcga taaggaccga gatgggttca tctcttgtaa ggatctgggg aatctcatga
241ggacgatggg ttacatgccc acggagatgg aactgattga gctcggccag caaatccgca
301tgaacttggg tggccgtgta gactttgatg actttgtgga gctgatgacc cccaaattgc
361ttgcagaaac agctgggatg atcggtgtcc aggagatgcg ggatgccttc aaggagtttg
421acacgaatgg agatggggag atcaccctgg tggagctaca gcaggccatg cagagactcc
481tgggggagcg gctcaccccc cgggagatct ctgaggttgt ccgggaggct gatgttaatg
541gagacggcac agttgacttt gaagagtttg tgaagatgat gtctcgcttg ccaactttct
601tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
661aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)