Construct: ORF ccsbBroad304_03790

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010675.1_s304c1, BRDN0000402783
Derived from:
ccsbBroadEn_03790
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CHMP1B (57132)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03790
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57132 CHMP1B charged multivesicular body... NM_020412.5 100% 100%
2 mouse 67064 Chmp1b charged multivesicular body... NM_024190.2 92.2% 97.9% (many diffs)
3 mouse 67028 2610002M06Rik RIKEN cDNA 2610002M06 gene NM_025921.3 82% 95.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
663
ORF length:
597
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc taacatggag aaacacctgt tcaacctgaa gttcgcggcc aaagaactga
121gtaggagtgc caaaaaatgc gataaggagg aaaaggccga aaaggccaaa attaaaaagg
181ccattcagaa gggcaacatg gaagttgcga ggatacacgc cgaaaatgcc atccgccaga
241agaaccaggc ggtgaatttc ttgagaatga gtgcgcgagt cgatgcagtg gctgccaggg
301tccagacggc ggtgacgatg ggcaaggtga ccaagtcgat ggctggtgtg gttaagtcga
361tggatgcgac attgaagacc atgaatctgg agaagatttc tgctttgatg gacaaattcg
421agcaccagtt tgagactctg gacgtccaga cgcagcaaat ggaagacacg atgagcagca
481cgacgacgct caccactccc cagaaccaag tggatatgct gctccaggaa atggcagatg
541aggcgggcct cgacctcaac atggagctgc cgcagggcca gaccggctcc gtgggcacga
601gcgtggcttc ggcggagcag gatgaactgt ctcagagact ggcccgcctt cgggatcaag
661tgtgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
721tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
781tctggatta

Download FASTA (ORF) (Full)