Construct: ORF ccsbBroad304_04251

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000687.1_s304c1, BRDN0000402388
Derived from:
ccsbBroadEn_04251
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TSC22D4 (81628)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04251
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 81628 TSC22D4 TSC22 domain family member 4 NM_001303043.2 99.8% 100% 795A>G;1051T>C
2 human 81628 TSC22D4 TSC22 domain family member 4 NM_030935.5 99.8% 100% 795A>G;1051T>C
3 human 81628 TSC22D4 TSC22 domain family member 4 NR_130118.2 52.2% (many diffs)
4 human 81628 TSC22D4 TSC22 domain family member 4 NR_130119.2 52.1% (many diffs)
5 mouse 78829 Tsc22d4 TSC22 domain family, member 4 NM_023910.6 83.9% 84.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1251
ORF length:
1185
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag cgggggcaag aagaagagta gtttccaaat caccagcgtc accacggact
121atgagggccc tgggagccca ggggcttcgg atccccctac cccacagccc ccaaccgggc
181ccccgccccg cctgcccaat ggggagccca gccccgatcc ggggggcaag ggcacccccc
241ggaatggctc cccaccacct ggggcccctt cctcccgttt ccgggtggtg aagctgcccc
301acggcctggg agagccttat cgccgcggtc gctggacgtg tgtggatgtt tatgagcgag
361acctggagcc ccacagcttc ggcggactcc tggagggaat tcgaggggcc tcagggggcg
421ccgggggcag atctttggat tccaggttgg agctggccag cctcggcctg ggcgccccca
481ccccaccgtc aggcctgtct cagggcccca cctcctggct ccgtccaccc cccacctctc
541ctggacctca ggcccgctcc ttcactgggg gactgggcca gctggtggtg cccagcaaag
601ccaaggcaga gaaaccccca ctgtcggcct cctcacccca gcagcgcccc ccagagcctg
661agaccggtga gagtgcgggc acatcccggg ctgccacgcc cctgccctct ctgagggtgg
721aagcggaggc tgggggctca ggggccagga cccctccact gtcccggagg aaagctgtag
781acatgcggct gcggatggag ttgggtgctc cagaagagat ggggcaggtg cccccacttg
841actctcgccc cagctccccg gccctctact tcacccacga tgccagcctg gttcacaaat
901ctccagaccc cttcggagca gtagcagctc agaagttcag cctggcccac tccatgttgg
961ccatcagtgg tcacctagac agcgacgatg atagtggctc cggaagcctg gttggcattg
1021acaacaaaat cgagcaagcc atggacttgg tgaagtccca cctcatgttt gcggtccggg
1081aggaggtgga ggtgctgaag gagcagatcc gggaactggc ggagcggaac gctgcgctgg
1141agcaggagaa tgggctgctg cgcgccctgg ccagcccgga gcagctggct cagctgccct
1201cctcgggggt cccacggctt gggccccctg cgcccaatgg gccctccgtc tgcccgactt
1261tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1321agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)