Construct: ORF ccsbBroad304_04381

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016924.1_s304c1, BRDN0000400977
Derived from:
ccsbBroadEn_04381
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MCRIP2 (84331)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04381
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84331 MCRIP2 MAPK regulated corepressor ... NM_138418.4 100% 100%
2 human 84331 MCRIP2 MAPK regulated corepressor ... NM_001331229.2 78.7% 78.1% 310_311ins102
3 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138605.2 50.1% (many diffs)
4 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138610.1 49.1% (many diffs)
5 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138609.1 49.1% (many diffs)
6 human 84331 MCRIP2 MAPK regulated corepressor ... NM_001331230.2 46.2% 46.2% 50_51ins258
7 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138607.2 45.8% (many diffs)
8 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138608.2 45.1% 1_164del;347_479del;778_1064del
9 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138604.2 44.9% 1_164del;345_481del;782_1068del
10 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138611.1 44.1% (many diffs)
11 human 84331 MCRIP2 MAPK regulated corepressor ... NR_138606.2 37.8% 1_164del;344_345ins128;517_803del
12 mouse 68241 Mcrip2 MAPK regulated corepressor ... NM_026633.3 85.8% 85% (many diffs)
13 mouse 68241 Mcrip2 MAPK regulated corepressor ... XM_006524838.2 78% 76.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
546
ORF length:
480
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgta caccatcacc aaggggccca gcaagctggt cgcgcagcgc cgcacaggtc
121ccacgcagca gcaggtggag ggccggctcg gcgagctcct gaaatgccgg cagcccgcgc
181cgccgacctc gcagcccccg cgggcgcagc cctttgcgca gccgccggga ccctggcccc
241tgtcgagtcc agggccaagg cttgtgttca atcgtgtgaa tggccggcgg gccccctcca
301cgtccccatc cttcgagggg acccaggaga cctacacagt ggcccacgag gagaatgtcc
361gctttgtgtc cgaagcctgg cagcaggtgc aacagcagct ggatggtggc ccagccggtg
421agggcgggcc aaggcctgtg cagtacgtgg agaggacccc caatccccgg ctgcagaact
481ttgtgcccat tgacctagac gagtggtggg cgcagcagtt cctggcgaga atcaccagct
541gttcctaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
601gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
661acctctggat ta

Download FASTA (ORF) (Full)