Construct: ORF ccsbBroad304_04492

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013573.1_s304c1, BRDN0000460690
Derived from:
ccsbBroadEn_04492
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP11B (89839)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04492
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89839 ARHGAP11B Rho GTPase activating prote... NM_001039841.2 100% 100%
2 human 9824 ARHGAP11A Rho GTPase activating prote... NM_199357.2 52.7% 44.1% (many diffs)
3 human 114118903 ARHGAP11A-SCG5 ARHGAP11A-SCG5 readthrough NM_001368319.1 42.2% 35.5% (many diffs)
4 human 89839 ARHGAP11B Rho GTPase activating prote... NR_148423.1 29.3% 1_673del;1475_2727del
5 human 9824 ARHGAP11A Rho GTPase activating prote... NM_014783.6 25.8% 21.8% (many diffs)
6 mouse 228482 Arhgap11a Rho GTPase activating prote... NM_181416.3 23.2% 18.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
870
ORF length:
801
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtgggatcag aggctggtga agttggccct gttgcagcat ctgcgggcct
121tctatggtat taaggtgaag ggtgtccgtg ggcagtgcga tcgcaggaga catgaaacag
181cagccacgga aatagggggt aaaatatttg gagtaccttt taatgcactg ccccattctg
241ctgtaccaga atatggacac attccaagct ttcttgtcga tgcttgcaca tctttagaag
301aacatattca taccgaaggg ctttttcgga aatcaggatc tgtgattcgc ctaaaagcac
361taaagaataa agtggatcat ggtgaaggtt gcctatcttc tgcacctcct tgtgatattg
421cgggacttct taagcagttt tttagggaac tgccagagcc cattctccca gctgatttgc
481atgaagcact tttgaaagct caacagttag gcacagagga aaagaataaa gctatactgt
541tgctctcctg tcttctggct gaccacacag ttcatgtatt aagatacttc tttaactttc
601tcaggaatgt ttctcttaga tccagtgaga ataagatgga tagcagcaat cttgcagtaa
661tatttgcacc aaatcttctt cagacaagtg aaggacatga aaagatgtct tctaacgcag
721aaaagaaggg cgtgtaccag actttatcct ggaaaagata ccagccatgt tgggtattga
781tggtctctgt gctactccat cactggaagg ctttgaagaa ggtgaatatg aaactcctgg
841tgaatataag agaaagagaa gacaacgtgt tgccaacttt cttgtacaaa gtggttggta
901agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
961ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)