Construct: ORF ccsbBroad304_05245

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016373.1_s304c1, BRDN0000462140
Derived from:
ccsbBroadEn_05245
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF438 (220929)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05245
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220929 ZNF438 zinc finger protein 438 NM_001143766.1 100% 100%
2 human 220929 ZNF438 zinc finger protein 438 NM_001143767.1 100% 100%
3 human 220929 ZNF438 zinc finger protein 438 NM_001143768.1 100% 100%
4 human 220929 ZNF438 zinc finger protein 438 NM_182755.2 100% 100%
5 human 220929 ZNF438 zinc finger protein 438 XM_006717396.3 100% 100%
6 human 220929 ZNF438 zinc finger protein 438 XM_011519371.3 100% 100%
7 human 220929 ZNF438 zinc finger protein 438 XM_011519372.2 100% 100%
8 human 220929 ZNF438 zinc finger protein 438 XM_011519373.3 100% 100%
9 human 220929 ZNF438 zinc finger protein 438 XM_011519374.2 100% 100%
10 human 220929 ZNF438 zinc finger protein 438 XM_017015864.2 100% 100%
11 human 220929 ZNF438 zinc finger protein 438 XM_017015865.2 100% 100%
12 human 220929 ZNF438 zinc finger protein 438 XM_017015866.1 100% 100%
13 human 220929 ZNF438 zinc finger protein 438 XM_017015867.2 100% 100%
14 human 220929 ZNF438 zinc finger protein 438 XM_017015868.1 100% 100%
15 human 220929 ZNF438 zinc finger protein 438 XM_017015869.2 100% 100%
16 human 220929 ZNF438 zinc finger protein 438 XM_017015870.2 100% 100%
17 human 220929 ZNF438 zinc finger protein 438 XM_017015871.2 100% 100%
18 human 220929 ZNF438 zinc finger protein 438 XM_017015872.2 100% 100%
19 human 220929 ZNF438 zinc finger protein 438 XM_024447868.1 100% 100%
20 human 220929 ZNF438 zinc finger protein 438 XM_024447869.1 100% 100%
21 human 220929 ZNF438 zinc finger protein 438 XM_024447870.1 100% 100%
22 human 220929 ZNF438 zinc finger protein 438 XM_024447871.1 100% 100%
23 human 220929 ZNF438 zinc finger protein 438 XM_024447872.1 100% 100%
24 human 220929 ZNF438 zinc finger protein 438 XM_024447873.1 100% 100%
25 human 220929 ZNF438 zinc finger protein 438 XM_017015863.2 98.6% 98.6% 1_33del
26 human 220929 ZNF438 zinc finger protein 438 NM_001143770.1 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
27 human 220929 ZNF438 zinc finger protein 438 NM_001143771.1 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
28 human 220929 ZNF438 zinc finger protein 438 XM_006717398.3 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
29 human 220929 ZNF438 zinc finger protein 438 XM_006717399.3 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
30 human 220929 ZNF438 zinc finger protein 438 XM_011519376.2 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
31 human 220929 ZNF438 zinc finger protein 438 XM_011519377.2 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
32 human 220929 ZNF438 zinc finger protein 438 XM_017015873.1 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
33 human 220929 ZNF438 zinc finger protein 438 XM_017015874.2 98.6% 98.4% 0_1ins31;3delG;6_7delTAinsAG
34 human 220929 ZNF438 zinc finger protein 438 NM_001143769.1 94% 94% 0_1ins147
35 human 220929 ZNF438 zinc finger protein 438 XM_024447875.1 94% 94% 0_1ins147
36 human 220929 ZNF438 zinc finger protein 438 NR_026560.1 54.6% 1_296del;476_477ins778;2003_2341del
37 human 220929 ZNF438 zinc finger protein 438 XM_017015875.1 47.3% 47.3% 0_1ins1308
38 human 220929 ZNF438 zinc finger protein 438 XM_017015876.1 47.3% 47.3% 0_1ins1308
39 human 220929 ZNF438 zinc finger protein 438 XM_017015877.1 47.3% 47.3% 0_1ins1308
40 human 220929 ZNF438 zinc finger protein 438 XM_017015878.1 47.3% 47.3% 0_1ins1308
41 human 220929 ZNF438 zinc finger protein 438 XM_017015879.1 47.3% 47.3% 0_1ins1308
42 human 220929 ZNF438 zinc finger protein 438 XM_017015880.2 47.3% 47.3% 0_1ins1308
43 human 220929 ZNF438 zinc finger protein 438 XM_017015881.1 47.3% 47.3% 0_1ins1308
44 human 220929 ZNF438 zinc finger protein 438 XM_017015882.1 47.3% 47.3% 0_1ins1308
45 human 220929 ZNF438 zinc finger protein 438 XM_024447876.1 47.3% 47.3% 0_1ins1308
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2553
ORF length:
2484
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcagaattct gtatcagtac caccaaaaga tgaaggtgaa tcaaacatcc
121cttctggaac aatacagagt aggaaaggtt tgcagaataa gagtcagttt aggaccattg
181caccaaaaat tgtgcccaaa gtcctaacgt ccagaatgct gccatgtcat tcaccatcac
241gctctgatca ggtgaatctg ggaccctcca tcaactccaa gctgctgggg atgtccaccc
301agaactatgc cctgatgcag gttgctggcc aggaggggac attttctctt gttgctctgc
361cacatgttgc ctcagctcag ccaattcaga aacccagaat gtccctacct gaaaacctga
421aacttcctat tcctagatat caacccccta gaaatagcaa agcatcaaga aagaaaccca
481tcctgatctt tcctaagagt ggctgtagca aagctcctgc ccaaacccaa atgtgtcctc
541agatgtcccc ttccccacct caccaccctg aactcctgta caaacccagt ccatttgagg
601aagtaccatc actagagcaa gccccagcca gcattagcac agctgcgctg accaatggaa
661gtgaccatgg ggacttgaga ccaccagtga ccaacaccca tggcagtctg aaccctcctg
721ctaccccagc atcatccaca ccagaggagc ctgccaagca ggacctcaca gctctttcag
781ggaaagcaca ctttgtaagc aagataacat ctagtaaacc ttctgctgtt gccagtgaaa
841aatttaaaga acaagttgat cttgcaaaaa ccatgaccaa tttatcacca accattcttg
901gcaatgcagt tcagttgatc tcttcagtcc ccaaagggaa actgccaatc ccaccctact
961caagaatgaa gacaatggag gtttacaaaa tcaaatcaga tgctaacatt gcaggttttt
1021ctttaccagg acctaaggcc gactgtgata agataccctc caccacagaa ggctttaatg
1081cagccaccaa ggtggcaagc aggctacctg ttccacaagt gtcacagcag agtgcctgtg
1141aaagtgcctt ttgtccaccc accaaacttg atcttaacca caaaacaaaa ctgaacagtg
1201gagcagcaaa gagaaaagga agaaaacgga aggtaccaga tgaaattttg gcatttcagg
1261gaaaaaggag gaaatatatc attaataagt gtagagatgg taaagaaaga gtaaaaaatg
1321atccccaaga attcagagac caaaagctgg ggaccctgaa aaaataccgt agcattatgc
1381ccaaacctat catggtcata cccactttgg cctccctggc ttctccaact acactacagt
1441cccagatgct tgggggccta ggacaggatg ttttgttaaa taattcactc actcctaaat
1501atcttggctg taagcaagac aacagctctt cccctaagcc cagctccgtg ttcagaaatg
1561gattctctgg cattaagaag ccttggcaca gatgtcacgt ctgcaaccac cacttccagt
1621tcaaacagca ccttcgagac cacatgaata cacacaccaa cagacgccct tacagttgtc
1681ggatttgtcg caagtcctat gtacgtcctg gcagcctgag cacacacatg aaacttcatc
1741atggtgagaa ccgtctgaag aaactcatgt gttgtgagtt ttgtgcaaaa gtgtttggcc
1801acatccgagt ctattttggc catctgaaag aagtgcatag ggttgtgatc agcactgagc
1861ctgcgcccag tgaactgcag ccaggagaca taccaaagaa cagagacatg agtgtgcgag
1921gcatggaggg atcattggag agggaaaaca agtccaacct ggaagaagac ttccttctaa
1981accaggcaga cgaagtcaaa ttacaaatca aatgtggtcg ttgtcagatt actgctcagt
2041cttttgcgga aataaaattt catttacttg atgttcatgg agaggaaatt gagggcaggc
2101tacaagaagg gaccttccca ggaagcaagg ggactcagga agagttggtg cagcacgcta
2161gccccgactg gaaaaggcat cctgagagag ggaagccgga gaaggttcat tcctcctccg
2221aggaatcaca tgcatgtcca agactgaaaa ggcagctcca ccttcatcag aatggcgtgg
2281aaatgctcat ggaaaatgaa ggaccccagt caggaaccaa caagccaagg gaaacctgcc
2341agggccctga gtgtcctggc ctccacacgt ttctcttgtg gtcccattca ggctttaact
2401gcctgctttg tgcagagatg ctgggacgga aagaggacct cctccaccac tggaagcacc
2461agcataactg tgaggaccct tccaaactgt gggctatttt aaatacggtc tccaaccagg
2521gagtgatcga actttccagt gaagctgaga aattgccaac tttcttgtac aaagtggttg
2581gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
2641accggtggcg cgttaagtcg acaatcaacc tctggatta

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