Construct: ORF ccsbBroad304_05897

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001312.1_s304c1, BRDN0000462266
Derived from:
ccsbBroadEn_05897
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BMP1 (649)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05897
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 649 BMP1 bone morphogenetic protein 1 NM_006129.5 99.9% 99.7% 2155G>A;2313G>T
2 human 649 BMP1 bone morphogenetic protein 1 NR_033403.2 81.4% (many diffs)
3 human 649 BMP1 bone morphogenetic protein 1 NR_033404.2 77.2% (many diffs)
4 human 649 BMP1 bone morphogenetic protein 1 NM_001199.4 72.8% 70.5% (many diffs)
5 mouse 12153 Bmp1 bone morphogenetic protein 1 NM_009755.3 88.6% 95.2% (many diffs)
6 mouse 12153 Bmp1 bone morphogenetic protein 1 XM_006518460.3 88.6% 95.2% (many diffs)
7 mouse 12153 Bmp1 bone morphogenetic protein 1 XM_017315805.1 77.3% 82.7% (many diffs)
8 mouse 12153 Bmp1 bone morphogenetic protein 1 XM_011244931.1 73.5% 79.6% (many diffs)
9 mouse 12153 Bmp1 bone morphogenetic protein 1 XR_001781089.1 73.1% (many diffs)
10 mouse 12153 Bmp1 bone morphogenetic protein 1 XM_011244932.2 67.4% 67.5% (many diffs)
11 mouse 12153 Bmp1 bone morphogenetic protein 1 XM_011244933.2 66.2% 68.6% (many diffs)
12 mouse 12153 Bmp1 bone morphogenetic protein 1 XR_001781090.1 61.2% (many diffs)
13 mouse 12153 Bmp1 bone morphogenetic protein 1 XR_383136.2 59.7% (many diffs)
14 mouse 12153 Bmp1 bone morphogenetic protein 1 NR_033241.1 59.1% (many diffs)
15 mouse 12153 Bmp1 bone morphogenetic protein 1 XR_001781091.1 57.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3027
ORF length:
2958
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcccggcgtg gcccgcctgc cgctgctgct cgggctgctg ctgctcccgc
121gtcccggccg gccgctggac ttggccgact acacctatga cctggcggag gaggacgact
181cggagcccct caactacaaa gacccctgca aggcggctgc ctttcttggg gacattgccc
241tggacgaaga ggacctgagg gccttccagg tacagcaggc tgtggatctc agacggcaca
301cagctcgtaa gtcctccatc aaagctgcag ttccaggaaa cacttctacc cccagctgcc
361agagcaccaa cgggcagcct cagaggggag cctgtgggag atggagaggt agatcccgta
421gccggcgggc ggcgacgtcc cgaccagagc gtgtgtggcc cgatggggtc atcccctttg
481tcattggggg aaacttcact ggtagccaga gggcagtctt ccggcaggcc atgaggcact
541gggagaagca cacctgtgtc accttcctgg agcgcactga cgaggacagc tatattgtgt
601tcacctatcg accttgcggg tgctgctcct acgtgggtcg ccgcggcggg ggcccccagg
661ccatctccat cggcaagaac tgtgacaagt tcggcattgt ggtccacgag ctgggccacg
721tcgtcggctt ctggcacgaa cacactcggc cagaccggga ccgccacgtt tccatcgttc
781gtgagaacat ccagccaggg caggagtata acttcctgaa gatggagcct caggaggtgg
841agtccctggg ggagacctat gacttcgaca gcatcatgca ttacgctcgg aacacattct
901ccaggggcat cttcctggat accattgtcc ccaagtatga ggtgaacggg gtgaaacctc
961ccattggcca aaggacacgg ctcagcaagg gggacattgc ccaagcccgc aagctttaca
1021agtgcccagc ctgtggagag accctgcaag acagcacagg caacttctcc tcccctgaat
1081accccaatgg ctactctgct cacatgcact gcgtgtggcg catctctgtc acacccgggg
1141agaagatcat cctgaacttc acgtccctgg acctgtaccg cagccgcctg tgctggtacg
1201actatgtgga ggtccgagat ggcttctgga ggaaggcgcc cctccgaggc cgcttctgcg
1261ggtccaaact ccctgagcct atcgtctcca ctgacagccg cctctgggtt gaattccgca
1321gcagcagcaa ttgggttgga aagggcttct ttgcagtcta cgaagccatc tgcgggggtg
1381atgtgaaaaa ggactatggc cacattcaat cgcccaacta cccagacgat taccggccca
1441gcaaagtctg catctggcgg atccaggtgt ctgagggctt ccacgtgggc ctcacattcc
1501agtcctttga gattgagcgc cacgacagct gtgcctacga ctatctggag gtgcgcgacg
1561ggcacagtga gagcagcacc ctcatcgggc gctactgtgg ctatgagaag cctgatgaca
1621tcaagagcac gtccagccgc ctctggctca agttcgtctc tgacgggtcc attaacaaag
1681cgggctttgc cgtcaacttt ttcaaagagg tggacgagtg ctctcggccc aaccgcgggg
1741gctgtgagca gcggtgcctc aacaccctgg gcagctacaa gtgcagctgt gaccccgggt
1801acgagctggc cccagacaag cgccgctgtg aggctgcttg tggcggattc ctcaccaagc
1861tcaacggctc catcaccagc ccgggctggc ccaaggagta cccccccaac aagaactgca
1921tctggcagct ggtggccccc acccagtacc gcatctccct gcagtttgac ttctttgaga
1981cagagggcaa tgatgtgtgc aagtacgact tcgtggaggt gcgcagtgga ctcacagctg
2041actccaagct gcatggcaag ttctgtggtt ctgagaagcc cgaggtcatc acctcccagt
2101acaacaacat gcgcgtggag ttcaagtccg acaacaccgt gtccaaaaag ggcttcaagg
2161cccacttctt ctcagacaag gacgagtgct ccaaggataa cggcggctgc cagcaggact
2221gcatcaacac gttcggcagt tatgagtgcc aatgccgcag tggcttcgtc ctccatgaca
2281acaagcacga ctgcaaagaa gccggctgtg accacaaggt gacatccacc agtggtacca
2341tcaccagccc caactggcct gacaagtatc ccagcaagaa tgagtgcacg tgggccatct
2401ccagcacccc cgggcaccgg gtcaagctga ccttcatgga gatggacatc gagtcccagc
2461ctgagtgtgc ctacgaccac ctagaggtgt tcgacgggcg agacgccaag gcccccgtcc
2521tcggccgctt ctgtgggagc aagaagcccg agcccgtcct ggccacaggc agccgcatgt
2581tcctgcgctt ctactcagat aactcggtcc agcgaaaggg cttccaggcc tcccacgcca
2641cagagtgcgg gggccaggta cgggcagacg tgaagaccaa ggacctttac tcccacgccc
2701agtttggcga caacaactac cctgggggtg tggactgtga gtgggtcatt gtggccgagg
2761aaggctacgg cgtggagctc gtgttccaga cctttgaggt ggaggaggag accgactgcg
2821gctatgacta catggagctc ttcgacggct acgacagcac agcccccagg ctggggcgct
2881actgtggctc agggcctcct gaggaggtgt actcggcggg agattctgtc ctggtgaagt
2941tccactcgga tgacaccatc accaaaaaag gtttccacct gcgatacacc agcaccaagt
3001tccaggacac actccacagc aggaagttgc caactttctt gtacaaagtg gttggtaagc
3061ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
3121ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)