Construct: ORF ccsbBroad304_06263

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015479.1_s304c1, BRDN0000407140
Derived from:
ccsbBroadEn_06263
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GBP1 (2633)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06263
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2633 GBP1 guanylate binding protein 1 NM_002053.3 99.8% 99.6% 1046C>G;1226C>G
2 human 2635 GBP3 guanylate binding protein 3 NM_018284.3 90.3% 85.9% (many diffs)
3 human 2635 GBP3 guanylate binding protein 3 XM_006710574.3 86.6% 82.5% (many diffs)
4 human 2635 GBP3 guanylate binding protein 3 NM_001319181.1 82.8% 79.5% (many diffs)
5 human 2635 GBP3 guanylate binding protein 3 NM_001319179.1 77.9% 73.7% (many diffs)
6 human 2635 GBP3 guanylate binding protein 3 XM_005270743.2 77.9% 73.7% (many diffs)
7 human 2635 GBP3 guanylate binding protein 3 XM_011541233.1 77.9% 73.7% (many diffs)
8 human 2635 GBP3 guanylate binding protein 3 XM_011541234.2 77.5% 73.1% (many diffs)
9 human 2633 GBP1 guanylate binding protein 1 XM_024446351.1 76.7% 75.8% (many diffs)
10 human 2635 GBP3 guanylate binding protein 3 NM_001319180.1 69.1% 64.3% (many diffs)
11 human 2635 GBP3 guanylate binding protein 3 XM_017001013.1 69.1% 64.3% (many diffs)
12 human 2635 GBP3 guanylate binding protein 3 XM_017001014.1 56.4% 51.5% (many diffs)
13 human 2635 GBP3 guanylate binding protein 3 NR_135007.1 37.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1842
ORF length:
1776
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc atcagagatc cacatgacag gcccaatgtg cctcattgag aacactaatg
121ggcgactgat ggcgaatcca gaagctctga agatcctttc tgccattaca cagcctatgg
181tggtggtggc aattgtgggc ctctaccgca caggcaaatc ctacctgatg aacaagctgg
241ctggaaagaa aaagggcttc tctctgggct ccacggtgca gtctcacact aaaggaatct
301ggatgtggtg tgtgccccac cccaagaagc caggccacat cctagttctg ctggacaccg
361agggtctggg agatgtagag aagggtgaca accagaatga ctcctggatc ttcgccctgg
421ccgtcctcct gagcagcacc ttcgtgtaca atagcatagg aaccatcaac cagcaggcta
481tggaccaact gtactatgtg acagagctga cacatagaat ccgatcaaaa tcctcacctg
541atgagaatga gaatgaggtt gaggattcag ctgactttgt gagcttcttc ccagactttg
601tgtggacact gagagatttc tccctggact tggaagcaga tggacaaccc ctcacaccag
661atgagtacct gacatactcc ctgaagctga agaaaggtac cagtcaaaaa gatgaaactt
721ttaacctgcc cagactctgt atccggaaat tcttcccaaa gaaaaaatgc tttgtctttg
781atcggcccgt tcaccgcagg aagcttgccc agctcgagaa actacaagat gaagagctgg
841accccgaatt tgtgcaacaa gtagcagact tctgttccta catctttagt aattccaaaa
901ctaaaactct ttcaggaggc atccaggtca acgggcctcg tctagagagc ctggtgctga
961cctacgtcaa tgccatcagc agtggggatc tgccgtgcat ggagaacgca gtcctggcct
1021tggcccagat agagaactca gctgcagtgc aaaaggctat tgcccactat gaacagcaga
1081tgggccagaa ggtgcagctg cccacagaaa gcctccagga gctgctggac ctgcacaggg
1141acagtgagag agaggccatt gaagtcttca tcaggagttc cttcaaagat gtggaccatc
1201tatttcaaaa ggagttagcg gcccagctag aaaaaaagcg ggatgacttt tgtaaacaga
1261atcaggaagc atcatcagat cgttgctcag gtttacttca ggtcattttc agtcctctag
1321aagaagaagt gaaggcggga atttattcga aaccaggggg ctatcgtctc tttgttcaga
1381agctacaaga cctgaagaaa aagtactatg aggaaccgag gaaggggata caggctgaag
1441agattctgca gacatacttg aaatccaagg agtctatgac tgatgcaatt ctccagacag
1501accagactct cacagaaaaa gaaaaggaga ttgaagtgga acgtgtgaaa gctgagtctg
1561cacaggcttc agcaaaaatg ttgcaggaaa tgcaaagaaa gaatgagcag atgatggaac
1621agaaggagag gagttatcag gaacacttga aacaactgac tgagaagatg gagaacgaca
1681gggtccagtt gctgaaagag caagagagga ccctcgctct taaacttcag gaacaggagc
1741aactactaaa agagggattt caaaaagaaa gcagaataat gaaaaatgag atacaggatc
1801tccagacgaa aatgagacga cgaaaggcat gtaccataag ctacccaact ttcttgtaca
1861aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1921ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)