Construct: ORF ccsbBroad304_06388

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017407.1_s304c1, BRDN0000403499
Derived from:
ccsbBroadEn_06388
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HNRNPF (3185)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06388
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3185 HNRNPF heterogeneous nuclear ribon... NM_001098204.1 99.9% 100% 810A>G
2 human 3185 HNRNPF heterogeneous nuclear ribon... NM_001098205.1 99.9% 100% 810A>G
3 human 3185 HNRNPF heterogeneous nuclear ribon... NM_001098206.1 99.9% 100% 810A>G
4 human 3185 HNRNPF heterogeneous nuclear ribon... NM_001098207.1 99.9% 100% 810A>G
5 human 3185 HNRNPF heterogeneous nuclear ribon... NM_001098208.1 99.9% 100% 810A>G
6 human 3185 HNRNPF heterogeneous nuclear ribon... NM_004966.3 99.9% 100% 810A>G
7 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166427.1 91.4% 98% (many diffs)
8 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166428.1 91.4% 98% (many diffs)
9 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166429.1 91.4% 98% (many diffs)
10 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166430.1 91.4% 98% (many diffs)
11 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166431.1 91.4% 98% (many diffs)
12 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_001166432.1 91.4% 98% (many diffs)
13 mouse 98758 Hnrnpf heterogeneous nuclear ribon... NM_133834.2 91.4% 98% (many diffs)
14 mouse 98758 Hnrnpf heterogeneous nuclear ribon... XM_006506829.3 91.4% 98% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1311
ORF length:
1245
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat gctgggccct gagggaggtg aaggctttgt ggtcaagctc cgtggcctgc
121cctggtcctg ctctgttgag gacgtgcaga acttcctctc tgactgcacg attcatgatg
181gggccgcagg tgtccatttc atctacacta gagagggcag gcagagtggt gaggcttttg
241ttgaacttgg atcagaagat gatgtaaaaa tggccctgaa aaaagacagg gaaagcatgg
301gacaccggta cattgaggtg ttcaagtccc acagaaccga gatggattgg gtgttgaagc
361acagtggtcc caacagtgcc gacagcgcca acgatggctt cgtgcggctt cgaggactcc
421catttggatg cacaaaggaa gaaattgttc agttcttctc agggttggaa attgtgccaa
481acgggatcac attgcctgtg gaccccgaag gcaagattac aggggaagcg ttcgtgcagt
541ttgcctcgca ggagttagct gagaaggctc tagggaaaca caaggagagg atagggcaca
601ggtacattga ggtgtttaag agcagccagg aggaagttag gtcatactca gatccccctc
661tgaagttcat gtccgtgcag cggccagggc cctatgaccg gcccgggact gccaggaggt
721acattggcat cgtgaagcag gcaggcctgg aaaggatgag gcctggtgcc tacagcacag
781gctacggggg ctacgaggag tacagtggcc tcagtgatgg ctacggcttc accaccgacc
841tgttcgggag agacctcagc tactgtctct ccgggatgta tgaccacaga tacggcgaca
901gtgagttcac agtgcagagc accacaggcc actgtgtcca catgaggggc ctgccgtaca
961aagcgaccga gaacgacatt tacaacttct tctctcctct caaccctgtg agagtccata
1021ttgagattgg cccagatgga agagtgacgg gtgaagcaga tgttgagttt gctactcatg
1081aagaagctgt ggcagctatg tccaaagaca gggccaatat gcagcacaga tatatagaac
1141tcttcttgaa ttcaacaaca ggggccagca atggggcgta tagcagccag gtgatgcaag
1201gcatgggggt gtctgctgcc caggccactt acagtggcct ggagagccag tcagtgagtg
1261gctgttacgg ggccggctac agtgggcaga acagcatggg tggctatgac tacccaactt
1321tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1381agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)