Construct: ORF ccsbBroad304_06968

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010305.1_s304c1, BRDN0000403913
Derived from:
ccsbBroadEn_06968
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC34A1 (6569)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06968
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6569 SLC34A1 solute carrier family 34 me... NM_003052.5 99.9% 99.8% 1784G>C
2 human 6569 SLC34A1 solute carrier family 34 me... XM_024446191.1 91.1% 90.9% 1006_1007ins168;1616G>C
3 human 6569 SLC34A1 solute carrier family 34 me... XM_017009773.2 79.7% 73.1% (many diffs)
4 human 6569 SLC34A1 solute carrier family 34 me... NM_001167579.2 51.7% 48.9% (many diffs)
5 human 6569 SLC34A1 solute carrier family 34 me... XM_017009774.1 50.4% 50.3% 0_1ins948;836G>C
6 human 6569 SLC34A1 solute carrier family 34 me... XM_017009775.2 49.7% 48.9% (many diffs)
7 human 6569 SLC34A1 solute carrier family 34 me... XR_941112.2 47% (many diffs)
8 mouse 20505 Slc34a1 solute carrier family 34 (s... NM_011392.2 86% 90.7% (many diffs)
9 mouse 20505 Slc34a1 solute carrier family 34 (s... XM_006517177.3 73.6% 77.7% (many diffs)
10 mouse 20505 Slc34a1 solute carrier family 34 (s... XM_006517178.3 61.5% 65.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1983
ORF length:
1917
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt gtcctacgga gagaggctgg ggtcccctgc tgtctcccca ctcccagtcc
121gtggggggca tgtgatgcga gggacggcct ttgcctacgt gcccagccct caggtcctac
181acaggatccc ggggacctct gcctatgcct tccccagcct gggccctgtg gcccttgctg
241agcacacctg cccctgtggg gaggtcctgg agcgccatga accactgcct gccaagctgg
301ccctggagga ggagcagaag ccagagtcca ggctggtccc caagctgcgc caggctggcg
361ccatgctgct caaggtgcca ctgatgctca ccttcctcta cctcttcgtc tgctccctgg
421acatgctcag ctcggccttc cagctggctg gagggaaggt ggctggtgac atcttcaagg
481ataacgccat cctgtccaac ccggtggccg ggctggtggt ggggatcctg gtgaccgtgc
541tggtgcagag ctccagcacc tccacatcca tcatcgtcag catggtctcc tctggcttgc
601tggaggtgag ctctgccatc cccatcatca tgggctccaa catcggcacc tctgtcacca
661acaccatcgt ggccctgatg caggcggggg acaggactga cttccggcgg gccttcgcgg
721gggccacggt gcatgactgc tttaactggc tgtcagtgct ggtcctgctg cccctggagg
781ctgccactgg ctacctgcac cacatcactc gacttgtggt ggcctccttc aacatccatg
841gtggccgtga tgctcctgac ctgctcaaga tcatcacaga gcccttcacg aagctcatca
901tccagctgga cgagtctgtg ataaccagca ttgccactgg tgatgagtcc ctgaggaacc
961acagtctcat ccagatctgg tgccacccag actccttaca ggctcccacc tccatgtcca
1021gagcagaggc caactccagc cagacccttg gaaatgccac catggagaaa tgcaaccaca
1081tctttgtgga cactggccta ccggacctgg ctgtggggct catcctgctg gcaggatccc
1141tggtgctgct gtgcacctgc ctcatcctcc tagtcaagat gctcaactcc ctgctcaagg
1201gccaagtggc caaggtcatc cagaaggtca tcaatacgga cttccctgcc cccttcacct
1261gggtcacagg ctactttgcc atggtggtgg gcgccagcat gaccttcgtg gtccagagca
1321gttctgtgtt cacctcggcc atcaccccac tcatcggtct tggtgtgatc agcattgaga
1381gggcctaccc gctcacactg ggttccaaca tcggcaccac caccacggcc atcctggctg
1441ccctggccag ccccagggag aagctgtcca gcgctttcca gattgccctc tgtcacttct
1501tcttcaacat ctcgggtatc cttctgtggt acccggtgcc ctgcacacgc ctgcccatcc
1561gcatggccaa ggcgctgggg aaacgcacgg ccaagtaccg ctggtttgcc gtcctctatc
1621tccttgtctg cttcctgctg ctgccctcac tggtgtttgg catctccatg gcaggctggc
1681aggtcatggt aggtgtgggc acgcccttcg gggccctgct ggccttcgtg gtgctcatca
1741atgtcctgca gagtcggagt cccgggcacc tgcccaagtg gttacagaca tgggacttcc
1801tgcctcgctg gatgcactcc ctgaagcccc tggaccacct catcaccccc gccaccctat
1861gctgtgccag gcctgagccc cgctcacccc cgctgccccc cagggtcttc ctggaggagc
1921taccccctgc cacaccctcc ccccgtcttg cactgcctgc tcaccacaat gccacccgcc
1981tctacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
2041tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
2101tctggatta

Download FASTA (ORF) (Full)

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