Construct: ORF ccsbBroad304_07471

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002137.1_s304c1, BRDN0000404395
Derived from:
ccsbBroadEn_07471
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPP6R2 (9701)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07471
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351645.2 99.9% 100% 2022G>C;2490T>G
2 human 9701 PPP6R2 protein phosphatase 6 regul... NM_014678.5 99.9% 100% 2022G>C;2490T>G
3 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029132.1 99.9% 100% 2022G>C;2490T>G
4 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001242899.2 99.8% 99.8% 732_734delCAG;2025G>C;2493T>G
5 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351644.2 99.8% 99.8% 2022G>C;2046_2048delAGC;2493T>G
6 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351646.2 99.8% 99.8% 969_970insAAG;2019G>C;2487T>G
7 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029130.1 99.1% 99.1% 2022G>C;2294_2314del;2511T>G
8 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001242900.2 99.1% 97.9% (many diffs)
9 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029129.1 99% 99% (many diffs)
10 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530731.1 97.6% 97.6% 1_66del;2088G>C;2556T>G
11 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530729.2 97.5% 97.5% (many diffs)
12 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530730.2 97.5% 97.5% (many diffs)
13 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530728.2 97.4% 97.4% (many diffs)
14 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001242898.2 97.1% 97.1% 1602_1682del;2103G>C;2571T>G
15 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351643.2 97.1% 97.1% 1602_1682del;2103G>C;2571T>G
16 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351641.2 97% 97% (many diffs)
17 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351642.2 97% 97% (many diffs)
18 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029127.2 97% 97% (many diffs)
19 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029116.1 96.9% 96.8% (many diffs)
20 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530727.2 96.8% 96.7% (many diffs)
21 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530726.2 96.7% 96.6% (many diffs)
22 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001365836.1 96.4% 96.3% (many diffs)
23 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029123.1 96.4% 96.3% (many diffs)
24 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029124.2 96.4% 96.3% (many diffs)
25 human 9701 PPP6R2 protein phosphatase 6 regul... XM_006724431.3 96.3% 96.2% (many diffs)
26 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029121.1 96.3% 96.2% (many diffs)
27 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029122.2 96.3% 96.2% (many diffs)
28 human 9701 PPP6R2 protein phosphatase 6 regul... XM_024452307.1 96.3% 96.2% (many diffs)
29 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530735.2 96.2% 96.1% (many diffs)
30 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530736.3 96.2% 96.1% (many diffs)
31 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530737.2 96.2% 96.1% (many diffs)
32 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530738.2 96.2% 96.1% (many diffs)
33 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530739.2 96.2% 96.1% (many diffs)
34 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029120.1 94.9% 95% (many diffs)
35 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530724.2 94.8% 94.9% (many diffs)
36 human 9701 PPP6R2 protein phosphatase 6 regul... XM_024452306.1 94.8% 94.9% (many diffs)
37 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530723.2 94.7% 94.8% (many diffs)
38 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530722.2 94.2% 94.2% (many diffs)
39 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530720.2 94.1% 94.1% (many diffs)
40 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530721.2 94.1% 94.1% (many diffs)
41 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530732.2 94% 94% (many diffs)
42 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530734.2 94% 94% (many diffs)
43 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029117.1 94% 94% (many diffs)
44 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029118.1 94% 94% (many diffs)
45 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029119.1 94% 94% (many diffs)
46 human 9701 PPP6R2 protein phosphatase 6 regul... XM_011530740.2 89% 88.5% (many diffs)
47 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351648.2 82.5% 82.6% 0_1ins486;1536G>C;2004T>G
48 human 9701 PPP6R2 protein phosphatase 6 regul... NM_001351647.2 80.2% 80.2% (many diffs)
49 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029136.1 79.6% 79.6% (many diffs)
50 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029134.1 79.5% 79.5% (many diffs)
51 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029135.1 79.5% 79.5% (many diffs)
52 human 9701 PPP6R2 protein phosphatase 6 regul... XM_017029133.1 79.4% 79.4% (many diffs)
53 mouse 71474 Ppp6r2 protein phosphatase 6, regu... NM_001356969.1 83% 81.7% (many diffs)
54 mouse 71474 Ppp6r2 protein phosphatase 6, regu... NM_026813.2 83% 81.7% (many diffs)
55 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_017316747.2 83% 81.7% (many diffs)
56 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248770.1 82.5% 81.1% (many diffs)
57 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521406.2 80.7% 79.4% (many diffs)
58 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248765.1 80.7% 79.4% (many diffs)
59 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248766.1 80.7% 79.4% (many diffs)
60 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521405.3 80.6% 79.3% (many diffs)
61 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248764.1 80.6% 79.3% (many diffs)
62 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248768.1 80.3% 78.9% (many diffs)
63 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248767.1 80.2% 78.8% (many diffs)
64 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_030248769.1 78.8% 77.3% (many diffs)
65 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521398.2 78.5% 77.1% (many diffs)
66 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521399.2 78.5% 77.1% (many diffs)
67 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521400.2 78.5% 77.1% (many diffs)
68 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521401.2 78.5% 77.1% (many diffs)
69 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521402.3 78.5% 77.1% (many diffs)
70 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521403.2 78% 76.6% (many diffs)
71 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XM_006521404.2 76.7% 75.2% (many diffs)
72 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XR_003951439.1 52.4% (many diffs)
73 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XR_384046.3 51.8% (many diffs)
74 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XR_003951440.1 41.8% (many diffs)
75 mouse 71474 Ppp6r2 protein phosphatase 6, regu... XR_003951441.1 35.8% (many diffs)
76 mouse 71474 Ppp6r2 protein phosphatase 6, regu... NM_027805.2 23.1% 21.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2862
ORF length:
2796
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt ctggaagttt gacttgaaca ccacgtccca tgttgacaag ctgctggaca
121aggagcatgt gacgctgcag gagttaatgg atgaagatga catcttgcag gagtgtaagg
181ctcagaacca gaagctgctg gacttcctgt gcaggcagca gtgcatggag gagctggtga
241gcctcatcac acaggatccg cccctggaca tggaggagaa ggtccgcttc aaatatccaa
301acacagcctg tgagcttctg acttgtgatg tgccgcagat cagcgaccgc ctcggtgggg
361acgagagcct gctgagcctc ctgtacgact tcttggacca tgagccgcct ctcaatcctc
421tgctcgccag ttttttcagc aagaccattg gcaatctcat tgcaagaaaa accgaacagg
481tgattacgtt tttgaagaag aaggacaagt tcatcagcct ggtgttgaag cacatcggca
541cctcagcgct tatggacctg ctgctgcgcc tggtcagctg tgtggagcca gccgggctcc
601ggcaggacgt cctgcactgg ctgaatgaag agaaggtcat ccagaggctt gtggagttga
661tccacccgag ccaggatgaa gataggcagt caaatgcttc tcagactctc tgtgacatag
721ttaggctggg cagagaccag ggcagtcagc tgcaagaggc tctggagcca gacccgctcc
781tcacagcgct ggagtcgcag gactgtgtgg agcagcttct gaagaacatg tttgatggag
841accggacgga gagctgcctc gtcagtggga ctcaggtgtt actcaccttg ctggaaacca
901ggcgggttgg gacagagggc ttggtggact ccttttctca gggactggaa aggtcatacg
961ctgtcagcag cagcgtacta cacggcatcg agcctcggct gaaggacttc caccagctcc
1021tgctcaaccc gcccaagaag aaagcgatcc tgaccaccat tggtgtgctg gaggagcccc
1081tggggaatgc ccgtctgcat ggcgcccgcc tcatggcagc actgctgcac acaaacacac
1141ccagcatcaa ccaggagctc tgccggctca acacgatgga cttactgctg gacttgttct
1201ttaagtacac ctggaataac tttttgcact tccaagtgga actatgcata gccgctattc
1261tctcccacgc tgcccgtgag gagaggacag aagccagcgg atccgagagc agggtggagc
1321ctccgcatga gaacgggaac cggagcctgg agactcccca gccggccgcc agcctccctg
1381acaacacaat ggtgacccac ctgttccaga agtgctgcct ggtgcagagg atcctggagg
1441cctgggaagc caacgaccac acgcaggcag cgggtggcat gagacgtggg aacatgggcc
1501acctcacacg gatcgccaac gcggtggtgc agaacctgga gcggggccct gtgcagacgc
1561acatcagcga ggtcatccga gggctccctg cggactgccg tggccgctgg gagagcttcg
1621tggaggagac gctgacggag acgaaccgca ggaacactgt ggacctggcc ttctctgact
1681accagatcca gcagatgaca gccaacttcg tggatcagtt tggcttcaat gatgaggagt
1741ttgccgacca ggacgacaac atcaatgccc cgtttgacag gatcgcagag atcaacttca
1801acatcgacgc tgacgaggac agtcccagcg cagctctgtt tgaggcctgc tgcagtgacc
1861gcatccagcc ctttgatgat gatgaggacg aggacatctg ggaggacagt gacactcgct
1921gtgctgcccg ggtgatggcc agacccaggt ttggagcccc ccatgcttca gagagttgct
1981caaagaatgg cccagagcgt ggaggccagg atgggaaggc gagcttggaa gcacacagag
2041atgcacctgg ggcaggtgcc ccaccggccc ccgggaagaa ggaagccccc cctgtggagg
2101gtgactcaga aggcgccatg tggacggcag tgtttgatga gccagcgaac tcaacgccca
2161cagccccagg agtggtgagg gacgtgggtt ccagtgtgtg ggcagctggc acctcagctc
2221cagaggagaa aggctgggcc aagttcactg acttccaacc tttctgctgc tccgagtcag
2281ggcccaggtg cagctctccg gtggacacag aatgcagcca tgctgagggc agccggagcc
2341aaggccctga gaaagccttc agcccggctt ctccatgtgc ctggaacgtg tgtgtcacca
2401ggaaggcccc cctgctggcc tctgacagta gctcctctgg gggctcccac agcgaggatg
2461gcgaccagaa ggcagcgagt gccatggatg cggtgagcag gggtcccggc cgggaggccc
2521ccccgctgcc cacagtggcc aggacagagg aggcggtcgg cagggtcggg tgtgctgaca
2581gccggctgtt aagccctgcc tgccccgcgc caaaggaagt gactgctgcc ccagccgtgg
2641ctgtgccccc cgaggctact gtggccatca ccacagcact gagcaaggct ggccccgcca
2701tacccacccc agcagtctct tctgcactgg ccgtggcggt ccccctaggg cccatcatgg
2761cagtcacagc agccccagcc atggtggcca ccctggggac agtgacaaag gacgggaaga
2821cagatgcccc gccagaagga gctgccttaa atggcccagt gtgcccaact ttcttgtaca
2881aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
2941ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)