Construct: ORF ccsbBroad304_07480

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015045.1_s304c1, BRDN0000462015
Derived from:
ccsbBroadEn_07480
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PHACTR2 (9749)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07480
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9749 PHACTR2 phosphatase and actin regul... NM_014721.3 99.9% 99.8% 590C>T
2 human 9749 PHACTR2 phosphatase and actin regul... NM_001100164.2 98.1% 97.5% (many diffs)
3 human 9749 PHACTR2 phosphatase and actin regul... NM_001100166.2 87.3% 87.3% 420_421ins240
4 human 9749 PHACTR2 phosphatase and actin regul... NM_001100165.2 85.7% 85.2% (many diffs)
5 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512670.3 84.2% 82.3% (many diffs)
6 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512669.3 82.8% 80.4% (many diffs)
7 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512665.2 76.2% 74.1% (many diffs)
8 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512673.3 75.8% 73.7% (many diffs)
9 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512666.1 75.6% 73.6% (many diffs)
10 mouse 215789 Phactr2 phosphatase and actin regul... NM_001195066.1 74.4% 72.7% (many diffs)
11 mouse 215789 Phactr2 phosphatase and actin regul... XM_006512667.2 73.6% 71.9% (many diffs)
12 mouse 215789 Phactr2 phosphatase and actin regul... NM_001195096.1 73.1% 71% (many diffs)
13 mouse 215789 Phactr2 phosphatase and actin regul... NM_001033257.4 72.5% 70.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1971
ORF length:
1902
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggacaacgcc gttgacggac tggacaaagc ttctatagca aactcagatg
121gccccacagc aggttcccaa acacctccct tcaaaagaaa ggggaaacta tccaccattg
181gtaaaatctt taagccttgg aaatggagga aaaagaagac cagcgacaaa tttagagaaa
241cctcggcagt attagaaagg aagatatcca cacgacaaag tagagaggag ctgataagaa
301ggggagtgct taaggaattg cctgatcaag atggagatgt aacagttaac tttgaaaatt
361caaacgggca catgataccc atcggagagg aatctacccg agaggaaaat gtagtaaagt
421ctgaagaagg taatggctct gtatctgaaa aaacaccacc tctggaggaa caggcagaag
481ataagaaaga gaacactgaa aaccactctg aaacaccggc agctcctgct ctacctcctt
541ctgctcctcc taagcctaga cccaaaccta aacccaaaaa atcacctgtg cctccgaaag
601gggccactgc tggggccagc cacaaaggtg atgaagtgcc tcccattaaa aaaaatatca
661aggctcctgg taagcaggcc cccgtccctc cacccaagcc agcaagccga aacacgaccc
721gagaggctgc tggctcctct cattcaaaaa aaacaactgg ctctaaagca tcagcttcgc
781catccacttc atccacctca tctcgtccca aagcttcaaa ggagacagtt tctagcaaag
841cagggacagt ggggaccacc aagggcaaga gaaaaactga caagcagcca ataacttctc
901acctgtcctc agacacaaca acttctggca catccgacct gaaaggagag cctgcagaga
961ccagagtgga gagtttcaaa ctcgaacaga ctgtccctgg agctgaggag cagaacacag
1021gcaaattcaa gtccatggtc cctccacccc ctgtggctcc agcaccttct cctctggccc
1081cccctctccc tcttgaggat cagtgcatta ctgcctcaga cactccagtt gtcctcgtca
1141gcgttggagc tgacctgccc gtctctgcct tagacccaag tcagcttctt tgggctgaag
1201agccgacgaa cagaaccact ctctactcag gcactggctt aagtgttaac agagaaaatg
1261caaaatgttt cacaaccaaa gaggagctgg ggaagacagt gcctcagcta ctgactcctg
1321ggctgatggg cgaatcttca gaatccttta gtgcctcaga agatgaaggc cacagggaat
1381accaagccaa tgactctgac tcggacgggc ctatcttgta caccgatgat gaggacgaag
1441acgaagatga ggatggcagt ggagaaagtg ctttggcaag taaaatacgc cggagggata
1501ctcttgctat caaacttggc aacagaccat ctaagaaaga actagaggac aaaaacatct
1561tgcagcgtac atctgaagaa gagaggcagg aaatccgaca acaaattgga accaagttag
1621tcaggaggct gagccagagg cccacaactg aagaattaga gcaaagaaac atcctaaaac
1681aaaagaatga agaagaggaa caagaagcaa aaatggaact taaacgcaga ctcagcagaa
1741agctcagcct gagacccaca gtggcagagc tacaagctcg aaggatcctg cgatttaacg
1801agtatgtaga agtcacggat tctcctgact atgaccgccg agcagacaag ccctgggcca
1861ggttaacacc tgcagacaag gcagcaataa ggaaagaact aaatgaattt aaaagcacag
1921aaatggaagt tcatgaagag agtcgacagt ttacaaggtt tcatcgtcca ttgccaactt
1981tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
2041agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)

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