Construct: ORF ccsbBroad304_08234

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005556.1_s304c1, BRDN0000409874
Derived from:
ccsbBroadEn_08234
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MRTO4 (51154)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08234
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51154 MRTO4 MRT4 homolog, ribosome matu... NM_016183.4 99.8% 100% 330G>A
2 human 51154 MRTO4 MRT4 homolog, ribosome matu... XM_006710675.4 80.1% 80.3% 0_1ins141;189G>A
3 mouse 69902 Mrto4 mRNA turnover 4, ribosome m... NM_001290810.1 88.8% 93.3% (many diffs)
4 mouse 69902 Mrto4 mRNA turnover 4, ribosome m... NM_023536.3 88.4% 92.8% (many diffs)
5 mouse 69902 Mrto4 mRNA turnover 4, ribosome m... XM_006539162.2 70.2% 73.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
783
ORF length:
717
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc caaatccaag cgcgacaaga aagtctcctt aaccaaaact gccaagaaag
121gcttggaatt gaaacaaaac ctgatagaag agcttcggaa atgtgtggac acctacaagt
181accttttcat cttctctgtg gccaacatga ggaacagcaa gctgaaggac atccggaacg
241cctggaagca cagccggatg ttctttggca aaaacaaggt gatgatggtg gccttgggtc
301ggagcccatc tgatgaatac aaagacaacc tgcaccaggt cagcaaaagg ttgaggggtg
361aggtgggtct cctgttcacc aaccgcacaa aggaagaggt gaatgagtgg ttcacgaaat
421acacagaaat ggactacgcc cgagctggta acaaagcagc tttcactgtg agcctggatc
481cagggcccct ggagcagttc ccccactcca tggagccaca gctcaggcag ctgggcctgc
541ccaccgccct caagagaggt gtggtgactc tgctgtctga ctacgaggtg tgcaaggagg
601gcgatgtgct gaccccagag caggctcgcg tcctgaagct ttttgggtat gagatggctg
661aattcaaggt gaccatcaaa tacatgtggg attcacagtc gggaaggttc cagcagatgg
721gagacgactt gccagagagc gcatctgagt ccacagaaga gtcagactca gaagatgatg
781actgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
841tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
901tctggatta

Download FASTA (ORF) (Full)

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