Construct: ORF ccsbBroad304_08274

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007299.1_s304c1, BRDN0000400270
Derived from:
ccsbBroadEn_08274
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC22A17 (51310)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08274
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51310 SLC22A17 solute carrier family 22 me... NM_020372.3 99.9% 100% 15C>T
2 human 51310 SLC22A17 solute carrier family 22 me... XM_005267747.4 99.9% 100% 15C>T
3 human 51310 SLC22A17 solute carrier family 22 me... XM_017021361.1 99.9% 100% 15C>T
4 human 51310 SLC22A17 solute carrier family 22 me... NM_016609.4 96.5% 96.4% 15C>T;1162_1163ins54
5 human 51310 SLC22A17 solute carrier family 22 me... XM_017021362.2 96.5% 96.4% 15C>T;1162_1163ins54
6 human 51310 SLC22A17 solute carrier family 22 me... XM_005267748.4 76.5% 76.5% 15C>T;837_838ins378
7 human 51310 SLC22A17 solute carrier family 22 me... NM_001289050.1 56.1% 55.9% 0_1ins654;508_509ins54
8 human 51310 SLC22A17 solute carrier family 22 me... NR_110290.1 49.4% (many diffs)
9 human 51310 SLC22A17 solute carrier family 22 me... XR_001750354.1 33.1% (many diffs)
10 human 51310 SLC22A17 solute carrier family 22 me... XR_002957556.1 32% (many diffs)
11 human 51310 SLC22A17 solute carrier family 22 me... XR_245694.4 31.9% (many diffs)
12 mouse 59049 Slc22a17 solute carrier family 22 (o... XM_006519337.3 88.6% 94% (many diffs)
13 mouse 59049 Slc22a17 solute carrier family 22 (o... XM_006519338.3 88.6% 94% (many diffs)
14 mouse 59049 Slc22a17 solute carrier family 22 (o... NM_021551.4 68.3% 72.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1680
ORF length:
1614
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaat
61tgggcatggc ctcggaccct atcttcacgc tggcgccccc gctgcattgc cactacgggg
121ccttcccccc taatgcctct ggctgggagc agcctcccaa tgccagcggc gtcagcgtcg
181ccagcgctgc cctagcagcc agcgccgcca gccgtgtcgc caccagtacc gacccctcgt
241gcagcggctt cgccccgccg gacttcaacc attgcctcaa ggattgggac tataatggcc
301ttcctgtgct caccaccaac gccatcggcc agtgggatct ggtgtgtgac ctgggctggc
361aggtgatcct ggagcagatc ctcttcatct tgggctttgc ctccggctac ctgttcctgg
421gttaccccgc agacagattt ggccgtcgcg ggattgtgct gctgaccttg gggctggtgg
481gcccctgtgg agtaggaggg gctgctgcag gctcctccac aggcgtcatg gccctccgat
541tcctcttggg ctttctgctt gccggtgttg acctgggtgt ctacctgatg cgcctggagc
601tgtgcgaccc aacccagagg cttcgggtgg ccctggcagg ggagttggtg ggggtgggag
661ggcacttcct gttcctgggc ctggcccttg tctctaagga ttggcgattc ctacagcgaa
721tgatcaccgc tccctgcatc ctcttcctgt tttatggctg gcctggtttg ttcctggagt
781ccgcacggtg gctgatagtg aagcggcaga ttgaggaggc tcagtctgtg ctgaggatcc
841tggctgagcg aaaccggccc catgggcaga tgctggggga ggaggcccag gaggccctgc
901aggacctgga gaatacctgc cctctccctg caacatcctc cttttccttt gcttccctcc
961tcaactaccg caacatctgg aaaaatctgc ttatcctggg cttcaccaac ttcattgccc
1021atgccattcg ccactgctac cagcctgtgg gaggaggagg gagcccatcg gacttctacc
1081tgtgctctct gctggccagc ggcaccgcag ccctggcctg tgtcttcctg ggggtcaccg
1141tggaccgatt tggccgccgg ggcatccttc ttctctccat gacccttacc ggcattgctt
1201ccctggtcct gctgggcctg tgggattgtg agcatcctat cttccccaca gtgtgggctc
1261aacaagggaa ccccaacaga gatctgaacg aggctgccat caccactttc tctgtccttg
1321ggctcttctc ctcccaagct gccgccatcc tcagcaccct ccttgctgct gaggtcatcc
1381ccaccactgt ccggggccgt ggcctgggcc tgatcatggc tctaggggcg cttggaggac
1441tgagcggccc ggcccagcgc ctccacatgg gccatggagc cttcctgcag cacgtggtgc
1501tggcggcctg cgccctcctc tgcattctca gcattatgct gctgccggag accaagcgca
1561agctcctgcc cgaggtgctc cgggacgggg agctgtgtcg ccggccttcc ctgctgcggc
1621agccaccccc tacccgctgt gaccacgtcc cgctgcttgc cacccccaac cctgccctct
1681gcccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1741attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1801ggatta

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