Construct: ORF ccsbBroad304_08507

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007318.1_s304c1, BRDN0000409583
Derived from:
ccsbBroadEn_08507
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL26 (55295)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08507
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55295 KLHL26 kelch like family member 26 NM_018316.3 99.8% 99.8% 906C>T;1624G>A
2 human 55295 KLHL26 kelch like family member 26 NM_001345982.2 97.2% 95.9% (many diffs)
3 human 55295 KLHL26 kelch like family member 26 NM_001345981.2 95.3% 95.3% 261_347del;993C>T;1711G>A
4 human 55295 KLHL26 kelch like family member 26 NM_001345983.1 85.2% 85.2% 0_1ins270;636C>T;1354G>A
5 human 55295 KLHL26 kelch like family member 26 NM_001345984.2 23.4% 22.1% (many diffs)
6 human 55295 KLHL26 kelch like family member 26 NM_001345985.2 16.1% 15.4% (many diffs)
7 mouse 234378 Klhl26 kelch-like 26 NM_178771.3 81.9% 85.3% (many diffs)
8 mouse 234378 Klhl26 kelch-like 26 NM_001122830.1 73.7% 76.9% (many diffs)
9 mouse 234378 Klhl26 kelch-like 26 XM_006509654.3 70.9% 74.4% (many diffs)
10 mouse 234378 Klhl26 kelch-like 26 XM_011242298.1 70.9% 74.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1911
ORF length:
1845
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggagtccggc ggtagcagcg gtggtgctgg tggcggcggc gctttcggcg
121cgggcccggg ccccgagcgc ccgaacagca cggccgacaa gaacggggcc ctcaagtgca
181ccttctcggc acccagccac agcaccagcc tcctgcaggg cctggccacc ctccgcgctc
241agggccagct cctcgatgtt gtgctgacta ttaacagaga ggcctttcct gcacacaagg
301tcgtcctggc tgcctgcagc gactacttca gggccatgtt caccggcggc atgcgggagg
361caagccagga cgtcatcgag ctgaagggcg tgtcggcccg tggcctgcgg cacatcatcg
421acttcgccta cagcgccgag gtgacactgg acctggactg cgtgcaggac gtgctgggcg
481cggccgtgtt cttgcagatg ctgcccgtgg tggagctgtg cgaggagttc ctgaaggcgg
541ccatgagcgt ggagacctgc ctcaacatcg gccagatggc caccaccttc agcctggcct
601cgctgcgaga gtcggtggat gccttcacct tccggcactt cctgcagatc gccgaggagg
661aggatttcct gcgcctgcca ctggagcgcc tggtcttctt cctgcagagc aaccggctgc
721agagctgtgc cgagatcgac ctgttccgcg cggccgtccg ctggctgcag catgacccgg
781cccggcggcc gcgcgccagc cacgtgctct gccacattcg cttcccgctc atgcagtcgt
841ccgagctggt ggacagcgtg cagacgctgg acatcatggt ggaggacgtg ctgtgccgcc
901agtatctgct ggaggccttc aactaccagg tgctgccctt ccggcagcac gagatgcagt
961ctccgcgcac tgccgtgcgc tcggatgtgc cctcgctcgt caccttcggc ggcacgccct
1021acaccgacag cgaccgctcg gtcagcagca aggtctacca gctgcctgag ccgggagccc
1081gccacttccg cgagctcacg gagatggagg taggctgcag ccacacgtgc gtggccgtgc
1141tggacaattt tgtgtacgtg gccggggggc agcacctgca gtaccgcagc ggcgagggcg
1201cagtggacgc ctgctaccgc tacgaccccc acctgaatcg ctggctgcgc ctgcaggcca
1261tgcaggaaag ccgcatccag ttccagctga acgtgctgtg cggcatggtg tacgccacgg
1321gcggccgcaa ccgagccggc agcctggcct ccgtggagcg gtactgcccc cggcgcaatg
1381agtggggcta cgcctgctcg ctgaagcgcc gtacctgggg ccatgctggg gccgcctcag
1441ggggccgcct ctacatctcg ggtggctacg ggatctcagt ggaggacaag aaggccctgc
1501actgctacga ccccgtggcc gaccagtggg agttcaaggc gcccatgagc gaaccccgcg
1561tgctacacgc catggtgggt gccggcggcc gcatctatgc cctcgggggc cgcatggacc
1621acgtggaccg ctgcttcgac gtgctggctg tggagtacta tgtgccggag acggaccagt
1681ggaccagcat gagccccatg cgggccggcc agtcagaggc cggctgctgc ctgctggaga
1741ggaagatcta catcgtcggg ggctacaact ggcgtctcaa caacgtcacg ggcatcgtac
1801aggtgtacaa cacggacacc gacgagtggg agcgggacct gcacttcccg gagtccttcg
1861caggcatagc ctgcgccccc gtcctgctgc cccgggccgg gaccaggagg tacccaactt
1921tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1981agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)