Construct: ORF ccsbBroad304_08578

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002109.1_s304c1, BRDN0000407218
Derived from:
ccsbBroadEn_08578
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OGDHL (55753)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08578
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347819.1 99.8% 99.8% (many diffs)
2 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_018245.3 99.8% 99.8% (many diffs)
3 human 55753 OGDHL oxoglutarate dehydrogenase ... XM_011539946.2 99.8% 99.8% (many diffs)
4 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001143996.1 94.1% 94.1% (many diffs)
5 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347820.1 94.1% 94.1% (many diffs)
6 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347823.1 93.9% 93.8% (many diffs)
7 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347824.2 93.9% 93.8% (many diffs)
8 human 55753 OGDHL oxoglutarate dehydrogenase ... NR_144683.2 79.6% (many diffs)
9 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001143997.1 79.2% 79.1% (many diffs)
10 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347821.2 79.2% 79.1% (many diffs)
11 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347822.1 79.2% 79.1% (many diffs)
12 human 55753 OGDHL oxoglutarate dehydrogenase ... NR_144686.2 77.1% (many diffs)
13 human 55753 OGDHL oxoglutarate dehydrogenase ... NR_144682.2 75% (many diffs)
14 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347825.2 73.3% 73.1% (many diffs)
15 human 55753 OGDHL oxoglutarate dehydrogenase ... NR_144685.2 72.9% (many diffs)
16 human 55753 OGDHL oxoglutarate dehydrogenase ... NR_144684.2 72.5% (many diffs)
17 human 55753 OGDHL oxoglutarate dehydrogenase ... XM_017016402.1 66.3% 66.2% (many diffs)
18 human 55753 OGDHL oxoglutarate dehydrogenase ... XM_017016403.1 66.3% 66.2% (many diffs)
19 human 55753 OGDHL oxoglutarate dehydrogenase ... NM_001347826.1 60.4% 60.2% (many diffs)
20 mouse 239017 Ogdhl oxoglutarate dehydrogenase-... XM_006518951.2 87.5% 92.9% (many diffs)
21 mouse 239017 Ogdhl oxoglutarate dehydrogenase-... NM_001081130.1 85.9% 91.2% (many diffs)
22 mouse 239017 Ogdhl oxoglutarate dehydrogenase-... XR_001781119.1 48.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3096
ORF length:
3030
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag tcagctgagg ctgctgccgt cccgtcttgg ggtgcaggct gcgaggctcc
121tggctgcaca tgacgtcccg gtgtttggct ggcgcagcag gtcctccggg ccaccggcca
181ccttcccaag cagcaaaggt ggaggcggct ccagttacat ggaggagatg tacttcgcct
241ggttggaaaa cccccagagt gtccacaagt cctgggacag cttcttcagg gaagccagcg
301aggaagcctt ttctggctct gctcagccac ggcccccttc tgttgtccat gagagcaggt
361ctgcagtctc aagtcggacc aagaccagca aattggtgga ggaccacctg gctgtgcagt
421ccctgatccg ggcctaccag atccggggtc accatgtggc ccagctggac cccctgggca
481ttctggatgc agacctggac tcctttgtgc cctcagactt gatcacaacc attgataaac
541tggccttcta tgaccttcag gaggctgacc ttgataagga gttccagctg ccgacaacca
601ccttcattgg gggctctgaa aacacccttt ctctgcggga gatcattcgg cgcctggaga
661acacctactg ccagcacatt ggcctggagt tcatgttcat caacgatgtg gagcagtgcc
721agtggatccg gcagaagttt gagacccctg gtgtgatgca gttctccagc gaggagaagc
781ggaccctgct ggcccggcta gtgcgctcca tgaggtttga agacttcctg gcccggaaat
841ggtcctcaga gaagcggttt ggcctggagg gctgtgaagt gatgattcct gccctcaaga
901ccatcatcga caaatccagc gagatgggga ttgagaatgt catcttgggg atgccacaca
961ggggaaggct gaacgtgctg gccaacgtga tccgcaagga cctggagcag atcttctgcc
1021agtttgaccc caagctggag gcggcggacg agggctccgg ggatgtcaag taccacctgg
1081gcatgtacca tgagaggatc aaccgcgtca ccaaccggaa catcactctg tcgctggttg
1141ccaacccctc ccacctggag gcagtggacc ctgtggtgca ggggaagaca aaggcagagc
1201agttctaccg tggagatgcc cagggcaaga aggtcatgtc catcctggtt catggggacg
1261ccgcctttgc tggccagggc gtggtatatg agaccttcca cctgagcgac ctgccctcct
1321acacgaccaa tggtaccgtg cacgtcgtcg tcaacaacca gattggattc accacagacc
1381cccgaatggc ccgctcctca ccatacccga ccgacgtggc ccgggtggtc aatgcgccta
1441tcttccatgt gaatgcagat gacccagagg ctgtgatata tgtgtgcagt gtggcagccg
1501aatggagaaa cactttcaac aaagatgttg tcgtggacct ggtctgttac cgccggcgtg
1561gccacaatga gatggacgag cccatgttca cccagctgct catgtacaag cagatccaca
1621gacaggtgcc tgtgctgaag aagtacgcag acaagctgat tgccgagggc acagtcaccc
1681tgcaggagtt tgaggaagaa attgccaaat acgaccggat ctgtgaggag gcttatggca
1741ggtccaagga taaaaagatt ctgcatataa agcactggtt gaactccccc tggcctggct
1801tcttcaacgt agatggggag cccaagagca tgacatgccc agccacgggg atccctgagg
1861acatgctcac ccacatcggc agtgtggcca gctctgtgcc cctggaggac tttaagatcc
1921acactggcct ctctcgcatt ctgcggggcc gtgcggacat gaccaagaac cggacggtgg
1981actgggcgtt ggcagagtac atggcctttg gctccctgct gaaggaaggc atccacgtgc
2041ggctcagcgg gcaggatgtg gagaggggca cattcagtca ccggcaccat gttctccatg
2101accaggaggt tgaccgcagg acgtgtgtgc ctatgaatca tctctggcct gaccaggccc
2161cgtacaccgt gtgcaacagc tccctctcgg agtacggagt cctgggcttt gagctgggct
2221atgccatggc cagccccaat gccctggtcc tctgggaggc ccagtttggg gacttccaca
2281acacggccca gtgcatcatc gaccagttca tcagcaccgg ccaggccaag tgggtgcggc
2341ataatggcat tgtgctgctg ctgccccatg gcatggaagg catgggccca gagcactcgt
2401cagcgaggcc cgaaaggttc ctgcagatga gcaatgatga ctcggatgcc taccctgcat
2461tcaccaagga cttcgaggtg agccagctct atgactgcaa ctggatcgtg gtcaactgct
2521ccacaccggc caactacttc cacgtgctgc gccggcagat cctgctgccc ttccgcaagc
2581cgctgattat cttcacacct aaatctctgc tgaggcaccc agaggccaag tccagctttg
2641accaaatggt atccgggacc agcttccagc gggtgattcc tgaagatggg gccgcagcac
2701gggcccctga gcaggtgcag cggctcatct tctgcacggg aaaggtgtac tatgacctgg
2761tgaaggagcg gagcagccag gacctggagg agaaagtggc catcacgcgc ctggagcaga
2821tctctccatt ccccttcgac ctgatcaagc aggaggcaga gaagtaccca ggtgcggagc
2881tggcctggtg tcaggaggag cacaagaaca tgggctacta tgactacatc agcccacgct
2941tcatgaccat cctgaggcgc gcacggccca tatggtatgt tggccgggac ccagcggctg
3001caccagccac aggaaacagg aacactcacc tggtgtcact gaagaagttt ctggatactg
3061ccttcaatct ccaggccttt gagggcaaga cattttaccc aactttcttg tacaaagtgg
3121ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
3181ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.