Construct: ORF ccsbBroad304_08793

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017670.1_s304c1, BRDN0000407974
Derived from:
ccsbBroadEn_08793
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EXOC4 (60412)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08793
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 60412 EXOC4 exocyst complex component 4 NM_001037126.1 99.7% 99.7% 1419_1419delGinsTGAG
2 human 60412 EXOC4 exocyst complex component 4 XM_005250523.5 97.6% 97.3% 1418_1421delCATCinsG;1424_1429delCTGCCA;1432_1455del
3 human 60412 EXOC4 exocyst complex component 4 NM_021807.4 48.6% 48.5% 1419_1424delGGGTCC;1428_2922delinsG
4 human 60412 EXOC4 exocyst complex component 4 XR_001744845.2 35.1% 1_27del;1446_1451delGGGTCC;1455_4042delinsG
5 mouse 20336 Exoc4 exocyst complex component 4 NM_001347089.1 79.2% 85.2% (many diffs)
6 mouse 20336 Exoc4 exocyst complex component 4 XM_011241262.1 55.9% 60.2% (many diffs)
7 mouse 20336 Exoc4 exocyst complex component 4 NM_009148.3 42.4% 45.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1488
ORF length:
1422
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggcagaagca gctggtggga aatacagaag cacagtcagc aaaagcaaag
121acccctcggg gctgctcatc tctgtgatca ggactctgtc tactagtgac gatgtcgaag
181acagggaaaa tgaaaagggt cgccttgaag aagcctacga gaaatgtgac cgtgacctgg
241atgaattgat tgtacagcac tacacagaat tgacgacagc cattcgcaca taccagagca
301tcacagagcg catcactaac tcccgaaata aaataaagca ggtaaaagag aacctgcttt
361catgcaagat gctgctgcac tgcaaacggg atgagcttcg gaaactgtgg attgaaggaa
421ttgagcataa gcatgtcctg aacttgttgg atgaaattga gaatatcaag caagtgcctc
481aaaagctgga acagtgcatg gccagcaagc actatctcag tgccactgac atgttggtgt
541cagcagttga gtctttggag ggccccctgc tccaggtgga aggactgagt gaccttcgac
601tagagcttca cagcaagaag atgaaccttc acttggttct catagatgaa ctacaccggc
661acctgtacat caaatcgact agccgagttg tgcagcgtaa caaggaaaaa gggaaaatca
721gctccctcgt gaaagatgct tctgttcctc tgattgatgt tacaaacctc cctactcctc
781gaaaattcct tgatacctct cactattcta ctgctggaag ctcaagtgtg agggagataa
841atctgcagga catcaaggaa gatttagaat tggatccaga ggaaaacagc accctgttta
901tgggtatcct cattaagggc ttggcgaaac tgaagaagat cccagaaaca gttaaggcaa
961tcatagagcg cttggagcag gagttgaagc aaattgtgaa gaggtctaca acccaggtgg
1021cagacagtgg ctatcagcgg ggggagaacg ttactgtgga gaaccaacca aggttgcttc
1081tagaactgct ggagttactg tttgacaagt ttaatgctgt agccgctgca cactctgtgg
1141tcctgggata cctgcaggac actgtagtga ctccactgac tcagcaggaa gatatcaaac
1201tgtatgatat ggcagatgta tgggtgaaga tccaagatgt tctacagatg ctattaactg
1261agtacttgga tatgaaaaat actcgtacgg cctctgaacc atcagctcaa ctaagctatg
1321ccagcactgg acgagagttt gcagcctttt ttgccaagaa gaaacctcaa aggccaaaaa
1381attctctttt caagttcgaa tcgtcctccc atgccatcag tatgagcgcc tatctgcgag
1441aacagagaag ggagctctat agtcggagtg gagaactgca aggtgagtgc ccaactttct
1501tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1561aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)