Construct: ORF ccsbBroad304_09527

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010526.1_s304c1, BRDN0000407583
Derived from:
ccsbBroadEn_09527
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACVR1C (130399)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09527
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 130399 ACVR1C activin A receptor type 1C NM_145259.3 99.7% 99.5% (many diffs)
2 human 130399 ACVR1C activin A receptor type 1C NM_001111031.1 89.6% 89.4% (many diffs)
3 human 130399 ACVR1C activin A receptor type 1C NM_001111032.2 83.5% 83.3% (many diffs)
4 human 130399 ACVR1C activin A receptor type 1C NM_001111033.2 67.9% 67.9% (many diffs)
5 mouse 269275 Acvr1c activin A receptor, type IC NM_001111030.1 85.8% 92.4% (many diffs)
6 mouse 269275 Acvr1c activin A receptor, type IC XM_006498085.3 77.3% 84.3% (many diffs)
7 mouse 269275 Acvr1c activin A receptor, type IC XM_011239108.2 77.3% 84.3% (many diffs)
8 mouse 269275 Acvr1c activin A receptor, type IC XM_006498086.3 73% 79.3% (many diffs)
9 mouse 269275 Acvr1c activin A receptor, type IC NM_001033369.3 64.5% 71.1% (many diffs)
10 mouse 269275 Acvr1c activin A receptor, type IC XR_374097.3 17.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1545
ORF length:
1479
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac ccgggcgctc tgctcagcgc tccgccaggc tctcctgctg ctcgcagcgg
121ccgccgagct ctcgccagga ctgaagtgtg tatgtctttt gtgtgattct tcaaacttta
181cctgccaaac agaaggagca tgttgggcat cagtcatgct aaccaatgga aaagagcagg
241tgatcaaatc ctgtgtctcc cttccagaac tgaatgctca agtcttctgt catagttcca
301acaatgttac caaaaccgaa tgctgcttca cagatttttg caacaacata acactgcacc
361ttccaacagc atcaccaaat gccccaaaac ttggacccat ggagctggcc atcattatta
421ctgtgcctgt ttgcctcctg tccatagctg cgatgctgac agtatgggca tgccagggtc
481gacagtgctc ctacaggaag aaaaagagac caaatgtgga ggaaccactc tctgagtgca
541atctggtaaa tgctggaaaa actctgaaag atctgattta tgatgtgacc gcctctggat
601ctggctctgg tctacctctg ttggttcaaa ggacaattgc aaggacgatt gtgcttcagg
661aaatagtagg aaaaggtaga tttggtgagg tgtggcatgg aagatggtgt ggggaagatg
721tggctgtgaa aatattctcc tccagagatg aaagatattg gtttcgtgag gcagaaattt
781accagacggt catgctgcga catgaaaaca tccttggttt cattgctgct gacaacaaag
841ataatggaac ttggactcaa ctttggctgg tatctgaata tcatgaacag ggctccttat
901atgactattt gaatagaaat atagtgacca tggctggaat gatcaagctg gcgctctcaa
961ttgctagtgg tctggcacac cttcatatgg agattgttgg tacacaaggt aaacctgcta
1021ttgctcatcg agacataaaa tcaaagaata tcttagtaaa aaagtgtgaa acttgtgcca
1081tagcggactt agggttggct gtgaagcatg attcaatact gaacactatc gacatacctc
1141agaatcctaa agtgggaacc aagaggtata tggctcctga aatgcttgat gatacaatga
1201atgtgaatat ctttgagtcc ttcaaacgag ctgacatcta ttctgttggt ctggtttact
1261gggaaatagc ccggaggtgt tcagtcggag gaattgttga ggagtaccaa ttgccttatt
1321atgacatggt gccttcagat ccctcgatag aggaaatgag aaaggttgtt tgtgaccaga
1381agtttcgacc aagtatccca aaccagtggc aaagttgtga agcactccga gtcatgggga
1441gaataatgcg tgagtgttgg tatgccaacg gagcggcccg cctaactgct cttcgtatta
1501agaagactat atctcaactt tgtgtcaaag aagactgcaa agcctaccca actttcttgt
1561acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1621gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)