Construct: ORF ccsbBroad304_09964

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012250.1_s304c1, BRDN0000460874
Derived from:
ccsbBroadEn_09964
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC25A42 (284439)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09964
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 284439 SLC25A42 solute carrier family 25 me... NM_001321544.2 99.7% 99.3% 115T>C;934C>A
2 human 284439 SLC25A42 solute carrier family 25 me... NM_178526.5 99.7% 99.3% 115T>C;934C>A
3 human 284439 SLC25A42 solute carrier family 25 me... XM_005259861.3 99.7% 99.3% 115T>C;934C>A
4 human 284439 SLC25A42 solute carrier family 25 me... XM_011527937.2 99.7% 99.3% 115T>C;934C>A
5 human 284439 SLC25A42 solute carrier family 25 me... XM_017026670.2 83% 82.7% 1_192del;307T>C;1126C>A
6 mouse 73095 Slc25a42 solute carrier family 25, m... NM_001007570.2 85.6% 91.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1020
ORF length:
954
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg taatggtgtg aaggaaggcc cggtgcgatt gcatgaggat gctgaggctg
121tcctgtcctc gtccgtctca tcaaagcgtg accacaggca agtgctcagc tccctgctgc
181ctggggccct ggctggtgcc cttgccaaaa cagcggtagc tcccctggac cgaaccaaaa
241tcatcttcca agtgtcttca aaaagatttt ctgccaagga ggccttccgg gtcctctact
301acacctacct caacgaggga tttctcagct tgtggcgcgg gaactcggcc accatggtgc
361gcgtggtgcc ctacgccgcc atccagttca gcgcacacga ggagtacaag cgcatcctgg
421gcagctacta tggcttccgt ggagaagccc tgcccccttg gcctcgcctc ttcgccggcg
481cactggctgg aacgacagcc gcttcactga cctaccccct ggacctggtc agagcgcgga
541tggccgtaac cccgaaggaa atgtacagca acatctttca tgtcttcatc cgcatctcga
601gagaagaggg gctgaagact ctctaccatg gatttatgcc caccgtgctg ggggtcattc
661cctacgctgg cctgagcttc ttcacctatg agacgctcaa gagcttgcac agagagtaca
721gcggccgccg gcagccctac cccttcgagc gcatgatctt cggcgcctgc gctggcctca
781tcgggcagtc ggcctcgtac ccgctggatg tggtgcggcg gcgcatgcag acggccggcg
841tcacgggcta cccgcgcgcc tccatcgccc gcacgctgcg caccatcgtg cgggaggagg
901gcgccgtgcg cggcctctac aaaggcttga gcatgaactg ggtcaagggt cccatcgccg
961tgggcatcag cttcaccacc ttcgacctca tgcagatcat gctgcggcac ctgcagagct
1021acccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1081attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1141ggatta

Download FASTA (ORF) (Full)