Construct: ORF ccsbBroad304_10191

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015411.1_s304c1, BRDN0000401611
Derived from:
ccsbBroadEn_10191
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FOXD4L6 (653404)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10191
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 653404 FOXD4L6 forkhead box D4 like 6 NM_001085476.1 99.9% 99.7% 1247C>G
2 human 286380 FOXD4L3 forkhead box D4 like 3 NM_199135.4 99.7% 99.2% 695G>A;1030A>G;1247C>G
3 human 653427 FOXD4L5 forkhead box D4 like 5 NM_001126334.1 98.8% 98% (many diffs)
4 human 349334 FOXD4L4 forkhead box D4 like 4 NM_199244.3 98.8% 98% (many diffs)
5 human 200350 FOXD4L1 forkhead box D4 like 1 NM_012184.4 91.9% 67.9% (many diffs)
6 human 2298 FOXD4 forkhead box D4 NM_207305.4 84.2% 78% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1320
ORF length:
1251
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaacctgcca agagctgagc gccttcgctc cacaccgcag cgcagcctcc
121gggactccga tggggaagac ggtaaaatcg atgtcctggg agaggaggaa gatgaagacg
181aggtggaaga cgaggaggag gcggcgagcc agcagttcct agagcagtcg ctccagccgg
241ggctgcaggt ggcccggtgg ggcggggttg cgcttccccg agagcacatc gagggcggcg
301gcggcccgag cgacccctca gagtttggca ccaagttcag ggcaccgcca aggtctgcgg
361cggcctctga agatgcccgg cagccggcaa agccccccta ctcgtacatc gcgctcatca
421ccatggccat cctgcaaaac ccgcacaagc gcctcacgct cagcggcatc tgcgccttca
481ttagtggccg cttcccctac taccgccgca agttccccgc ctggcagaac agcatccgcc
541acaacctctc gctgaacgac tgcttcgtta agatcccccg cgagccgggc cacccaggca
601agggcaacta ctggagcctg gaccccgcct cccaagacat gttcgacaat ggcagctttc
661tccggcgtag gaagcgtttc aagcgccacc aactgacccc gggagcccac ctgccccacc
721ccttccctct acctgctgca cacgccgccc tgcacaaccc ccacccaggc cctctgcttg
781gggcccctgc cccgccgcag ccagtcccgg gggcctaccc caacaccgcc cccgggagac
841gcccttacgc tctgctgcac ccgcatcctc ttcgctacct actgctctcg gcccccgtct
901atgccggggc accgaagaaa gcagaaggcg cggccctggc gaccccggca cccttcccgt
961gctgcagccc tcacttggtc ctcagccttg ggaggagggc aagggtctgg cgtcgccacc
1021gggaggcgga tgcatctctt tcagcattga gagtattatg caaggggtca ggggagcggg
1081tacaggggct gcgcagagtt tgtccccgac cgcgtggagc tactgccacc tgctccagcg
1141accatcaagc ctgttgcatc cccagaccgc tgcccctttg ctgcaagtgt ccgccgccgc
1201cgctgctcgg acaattttgc agcaatagca gcagcatcag gaggaggact gcgccaacgg
1261ctgcgctccc accaagggcg cggtgctggg cgggcacctg tcggcctcgt cggcgctgct
1321tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1381attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1441ggatta

Download FASTA (ORF) (Full)