Construct: ORF ccsbBroad304_10438

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004527.1_s304c1, BRDN0000403038
Derived from:
ccsbBroadEn_10438
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LGALS8 (3964)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10438
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3964 LGALS8 galectin 8 NM_006499.4 98.8% 98.3% (many diffs)
2 human 3964 LGALS8 galectin 8 NM_201545.2 98.8% 98.3% (many diffs)
3 human 3964 LGALS8 galectin 8 XM_011544188.3 88.8% 86% (many diffs)
4 human 3964 LGALS8 galectin 8 NM_201543.3 87.1% 86.6% (many diffs)
5 human 3964 LGALS8 galectin 8 NM_201544.3 87.1% 86.6% (many diffs)
6 human 3964 LGALS8 galectin 8 XM_017001274.2 77.2% 74.3% (many diffs)
7 human 3964 LGALS8 galectin 8 XM_017001275.2 62.1% 61.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1140
ORF length:
1074
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt gtccttaaac aacctacaga atatcatcta taacccggta atcccgtatg
121ttggcaccat tcccgatcag ctggatcctg gaactttgat tgtgatatgt gggcatgttc
181ctagtgacgc agacagattc caggtggatc tgcagaatgg cagcagtgtg aaacctcgag
241ccgatgtggc ctttcatttc aatcctcgtt tcaaaagggc cggctgcatt gtttgcaata
301ctttgataaa tgaaaaatgg ggacgggaag agatcaccta tgacacgcct ttcaaaagag
361aaaagtcttt tgagatcgtg attatggtgc taaaggacaa attccaggtg gctgtaaatg
421gaaaacatac tctgctctat ggccacagga tcggcccaga gaaaatagac actctgggca
481tttatggcaa agtgaatatt cactcaattg gttttagctt cagctcggac ttacaaagta
541cccaagcatc tagtctggaa ctgacagaga taagtagaga aaatgttcca aagtctggca
601cgccccagct tcctagtaat agaggaggag acatttctaa aatcgcaccc agaactgtct
661acaccaagag caaagattcg actgtcaatc acactttgac ttgcaccaaa ataccaccta
721tgaactatgt gtcaaagagc ctgccattcg ctgcaaggtt gaacaccccc atgggccctg
781gacgaactgt cgtcgttaaa ggagaagtga atgcaaatgc caaaagcttt aatgttgacc
841tactagcagg aaaatcaaag gatattgctc tacacttgaa cccacgcctg aatattaaag
901catttgtaag aaattctttt cttcaggagt cctggggaga agaagagaga aatattacct
961ctttcccatt tagtcctggg atgtactttg agatgataat ttactgtgat gttagagaat
1021tcaaggttgc agtaaatggc gtacacagcc tggagtacaa acacagattt aaagagctca
1081gcagtattga cacgctggaa attaatggag acatccactt actggaagta tggagctggt
1141acccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1201attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1261ggatta

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