Construct: ORF ccsbBroad304_10548

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003874.1_s304c1, BRDN0000461286
Derived from:
ccsbBroadEn_10548
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ASZ1 (136991)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10548
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_001301821.2 83.8% 83.2% (many diffs)
2 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_130768.3 82.3% 81.4% (many diffs)
3 human 136991 ASZ1 ankyrin repeat, SAM and bas... NM_001301822.2 38.5% 37.6% (many diffs)
4 mouse 74068 Asz1 ankyrin repeat, SAM and bas... NM_023729.3 71.5% 70.5% (many diffs)
5 mouse 74068 Asz1 ankyrin repeat, SAM and bas... XM_006505176.3 44.9% 44.4% (many diffs)
6 mouse 74068 Asz1 ankyrin repeat, SAM and bas... XM_006505178.3 44.9% 44.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1248
ORF length:
1179
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcggcgagc gcgctgcgag gcctgccagt ggctggcgga ggcgagagta
121gcgagagcga ggatgatggc tgggagattg ggtatctcga ccggacgtct cagaaattga
181aaaggctatt acccattgaa gaaaagaaag aaaaatttaa gaaagcaatg accatcggag
241atgtttcatt ggtccaggag ctcctagatt ctggcattag tgtagattcc aactttcagt
301atggatggac tccccttatg tatgctgcta gtgttgccaa tgcagagctg gttcgggtcc
361ttttggacag aggtgctaat gcaagctttg agaaggataa gcaaagtatt ttgataactg
421catgttctgc tcatggctca gaggaacaga tcttgaagtg tgtagaacta ctactttcaa
481gaaatgctga tccaaatgtt gcttgtagga gacttatgac cccaatcatg tatgctgctc
541gagatggtca cacccaggtt gttgctctcc ttgttgctca tggagcagaa gttaataccc
601aggatgagaa tggttacact gctttaacgt gggcagcacg tcagggtcat aaaaatatag
661ttttgaagtt gcttgaactt ggagctaata aaatgctaca aaccaaagat ggaaagatgc
721caagtgagat tgcaaaaaga aacaaacatc atgagatctt caacttactt tcttttactt
781taaatccatt ggaaggaaaa cttcaacagc taactaaaga agacactatt tgtaaaatat
841tgacaacaga ttctgataga gaaaaagatc acatttttag ttcatataca gcatttggag
901atctggaagt atttttacat ggtcttggac ttgaacatat gacagattta ctaaaggaaa
961gggatataac gttaagacat cttttgacca tgagggaaga tgaatttaca aagaatggaa
1021ttaccagtaa agaccagcag aaaattctgg ctgctcttaa agaactacag gtagaagaga
1081tacaatttgg agagctatct gaagagacaa agttggaaat cagtggtgat gagttcctca
1141actttcttct caaattaaat aaacagtgtg gccatttaat aacagctgta cagaatgtta
1201ttactgagtt acctgtaaat tctcaaaagg tattctacaa aagttatttg ccaactttct
1261tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1321aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

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